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Aliases for GC14P103195 Gene

Subcategory (RNA class) for GC14P103195 Gene

miRNA

Quality Score for this RNA gene is

10.2

Aliases for GC14P103195 Gene

No Aliases found

ORGUL Members for GC14P103195 Gene

No data available for External Ids for GC14P103195 Gene

Summaries for GC14P103195 Gene

GeneCards Summary for GC14P103195 Gene

GC14P103195 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC14P103195 Gene - the ORGUL cluster for this gene includes several descriptions:

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC14P103195

Additional gene information for GC14P103195 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC14P103195 Gene

Genomics for GC14P103195 Gene

GeneHancer (GH) Regulatory Elements for GC14P103195 Gene

Promoters and enhancers for GC14P103195 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I101020 Enhancer 0.5 ENCODE 550.8 -1.0 -997 1 KLF1 ZNF488 KLF8 ZNF248 ZBTB1 GC14P103195 MIR379 MEG9 ENSG00000222185 MEG8
GH14I101004 Enhancer 0.7 Ensembl ENCODE 0.4 -16.9 -16897 1.9 GATA3 MNT MYC TCF7L2 MIR134 MIR487A MIR154 MIR323B MIR485 MIR377 MIR496 MIR376C MIR1185-1 MIR1185-2
GH14I101001 Enhancer 0.6 ENCODE 0.3 -20.3 -20332 0.7 FOXA1 ZEB1 ZFHX2 JUND GATA3 ZNF24 FOS HNF4A EGR2 MEG8 ENSG00000222185 GC14P103195
GH14I101008 Enhancer 0.2 ENCODE 0.4 -13.3 -13283 0.2 MIR487A MIR134 MIR323B MIR485 MIR154 MIR377 MIR496 MIR1185-1 MIR300 MIR376C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC14P103195 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC14P103195 Gene

Genomic Locations for GC14P103195 Gene
chr14:101,021,982-101,022,178
(GRCh38/hg38)
Size:
197 bases
Orientation:
Plus strand

Genomic View for GC14P103195 Gene

Genes around GC14P103195 on UCSC Golden Path with GeneCards custom track

GC14P103195 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC14P103195 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC14P103195 Gene

ORGUL Member Location for GC14P103195 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC14P103195 Gene

Proteins for GC14P103195 Gene

Post-translational modifications for GC14P103195 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC14P103195 Gene

Domains & Families for GC14P103195 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC14P103195 Gene

Function for GC14P103195 Gene

Animal Model Products

miRNA for GC14P103195 Gene

miRTarBase miRNAs that target GC14P103195

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC14P103195 Gene

Localization for GC14P103195 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC14P103195 Gene

Pathways & Interactions for GC14P103195 Gene

SuperPathways for GC14P103195 Gene

No Data Available

Interacting Proteins for GC14P103195 Gene

Gene Ontology (GO) - Biological Process for GC14P103195 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC14P103195 Gene

Drugs & Compounds for GC14P103195 Gene

No Compound Related Data Available

Transcripts for GC14P103195 Gene

fRNAdb Secondary structures for GC14P103195 Gene

  • FR131381
  • FR251574

Alternative Splicing Database (ASD) splice patterns (SP) for GC14P103195 Gene

No ASD Table

Relevant External Links for GC14P103195 Gene

GeneLoc Exon Structure for
GC14P103195

No data available for mRNA/cDNA for GC14P103195 Gene

Expression for GC14P103195 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC14P103195 Gene

Orthologs for GC14P103195 Gene

No data available for Orthologs and Evolution for GC14P103195 Gene

Paralogs for GC14P103195 Gene

No data available for Paralogs for GC14P103195 Gene

Variants for GC14P103195 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC14P103195 Gene

Disorders for GC14P103195 Gene

No disorders were found for GC14P103195 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC14P103195 Gene

Publications for GC14P103195 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Clustering and conservation patterns of human microRNAs. (PMID: 15891114) Altuvia Y … Margalit H (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1
  4. Identification of clustered microRNAs using an ab initio prediction method. (PMID: 16274478) Sewer A … Zavolan M (BMC bioinformatics 2005) 1
  5. A pancreatic islet-specific microRNA regulates insulin secretion. (PMID: 15538371) Poy MN … Stoffel M (Nature 2004) 1

Products for GC14P103195 Gene

Sources for GC14P103195 Gene

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