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Aliases for GC14P099215 Gene

Subcategory (RNA class) for GC14P099215 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC14P099215 Gene

No Aliases found

ORGUL Members for GC14P099215 Gene

No data available for External Ids for GC14P099215 Gene

Summaries for GC14P099215 Gene

GeneCards Summary for GC14P099215 Gene

GC14P099215 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC14P099215 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC14P099215

Additional gene information for GC14P099215 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC14P099215 Gene

Genomics for GC14P099215 Gene

GeneHancer (GH) Regulatory Elements for GC14P099215 Gene

Promoters and enhancers for GC14P099215 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J099225 Promoter/Enhancer 2.4 UCNEbase FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.9 16891 13.2 SP1 ZSCAN21 SP7 HDGF IKZF1 GLIS2 PKNOX1 CREB1 ZBTB8A ZNF600 CCNK BCL11B ENSG00000234648 RPL3P4 SETD3 GC14M099236 GC14M099237 GC14P099215
GH14J099217 Enhancer 0.9 ENCODE dbSUPER 0.7 +3.1 3058 2.1 ZNF384 MAFK SP7 IKZF1 GLIS2 ZIC2 ZSCAN4 PATZ1 ZNF316 RUNX3 SETD3 GC14P099215 GC14M099237 GC14M099236 BCL11B
GH14J099206 Enhancer 0.8 dbSUPER 0.7 -3.3 -3259 10.5 MAFK ZBTB8A ZNF600 ZIC2 ZSCAN4 ZEB2 ZNF692 ZNF561 ZNF316 MNT SETD3 DEGS2 GC14P099215 GC14M099194 GC14M099192 BCL11B
GH14J099224 Enhancer 0.6 ENCODE dbSUPER 0.4 +9.4 9409 0.2 ZNF18 CTCF ZNF143 GC14P099215 GC14M099236 GC14M099237 BCL11B
GH14J099194 Enhancer 0.7 dbSUPER 0.4 -19.7 -19690 2.5 MAFK ZBTB8A ZNF600 ZEB2 PATZ1 ZNF341 ZBTB44 NFE2 ZNF10 OSR2 GC14M099192 GC14M099194 GC14P099215 BCL11B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC14P099215 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC14P099215 Gene

Genomic Locations for GC14P099215 Gene
chr14:99,215,290-99,215,529
(GRCh38/hg38)
Size:
240 bases
Orientation:
Plus strand

Genomic View for GC14P099215 Gene

Genes around GC14P099215 on UCSC Golden Path with GeneCards custom track

GC14P099215 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC14P099215 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC14P099215 Gene

ORGUL Member Location for GC14P099215 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC14P099215 Gene

Proteins for GC14P099215 Gene

Post-translational modifications for GC14P099215 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC14P099215 Gene

Domains & Families for GC14P099215 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC14P099215 Gene

Function for GC14P099215 Gene

Phenotypes From GWAS Catalog for GC14P099215 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC14P099215 Gene

Localization for GC14P099215 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC14P099215 Gene

Pathways & Interactions for GC14P099215 Gene

PathCards logo

SuperPathways for GC14P099215 Gene

No Data Available

Interacting Proteins for GC14P099215 Gene

Gene Ontology (GO) - Biological Process for GC14P099215 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC14P099215 Gene

Drugs & Compounds for GC14P099215 Gene

No Compound Related Data Available

Transcripts for GC14P099215 Gene

fRNAdb Secondary structures for GC14P099215 Gene

  • FR163498
  • FR274290

Alternative Splicing Database (ASD) splice patterns (SP) for GC14P099215 Gene

No ASD Table

Relevant External Links for GC14P099215 Gene

GeneLoc Exon Structure for
GC14P099215

No data available for mRNA/cDNA for GC14P099215 Gene

Expression for GC14P099215 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC14P099215 Gene

Orthologs for GC14P099215 Gene

No data available for Orthologs and Evolution for GC14P099215 Gene

Paralogs for GC14P099215 Gene

No data available for Paralogs for GC14P099215 Gene

Variants for GC14P099215 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC14P099215 Gene

Disorders for GC14P099215 Gene

No disorders were found for GC14P099215 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC14P099215 Gene

Publications for GC14P099215 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC14P099215 Gene

Products for GC14P099215 Gene

Sources for GC14P099215 Gene

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