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Aliases for GC14P071399 Gene

Subcategory (RNA class) for GC14P071399 Gene

snoRNA

Quality Score for this RNA gene is

12

Aliases for GC14P071399 Gene

No Aliases found

ORGUL Members for GC14P071399 Gene

No data available for External Ids for GC14P071399 Gene

Summaries for GC14P071399 Gene

GeneCards Summary for GC14P071399 Gene

GC14P071399 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC14P071399 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC14P071399 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC14P071399 Gene

Genomics for GC14P071399 Gene

GeneHancer (GH) Regulatory Elements for GC14P071399 Gene

Promoters and enhancers for GC14P071399 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I071397 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.0 989 4.2 BACH1 EBF1 BMI1 BATF KLF5 RELA GATA3 POLR2A ATF7 ETV6 GC14P071399 SNORD56B PCNX1 SIPA1L1 LOC102724015 GC14P071408
GH14I071395 Enhancer 0.6 dbSUPER 0.8 -2.3 -2324 1.3 SOX5 SOX13 GATAD2A FOXA2 RXRA FOXA3 RAD21 FOXA1 RARA JUND GC14P071399 GC14M071365 SIPA1L1
GH14I071370 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.4 -26378 2.9 PKNOX1 FOXA2 INSM2 FEZF1 BATF ZNF213 ZNF366 ETV6 OVOL3 CEBPB LOC102724015 PCNX1 SIPA1L1 GC14M071365 GC14P071399
GH14I071396 Enhancer 0.5 ENCODE dbSUPER 0.8 -3.1 -3097 0.2 ZBTB33 SIPA1L1 GC14P071399 GC14M071365
GH14I071393 Enhancer 0.4 dbSUPER 0.8 -4.0 -3953 0.9 CBFA2T3 ATF2 SIPA1L1 LOC102724015 GC14P071399 GC14M071365
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC14P071399 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC14P071399 Gene

Genomic Locations for GC14P071399 Gene
chr14:71,398,336-71,398,407
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand

Genomic View for GC14P071399 Gene

Genes around GC14P071399 on UCSC Golden Path with GeneCards custom track

GC14P071399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC14P071399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC14P071399 Gene

Proteins for GC14P071399 Gene

Post-translational modifications for GC14P071399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC14P071399 Gene

Domains & Families for GC14P071399 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC14P071399 Gene

Function for GC14P071399 Gene

Animal Model Products

miRNA for GC14P071399 Gene

miRTarBase miRNAs that target GC14P071399

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC14P071399 Gene

Localization for GC14P071399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC14P071399 Gene

Pathways & Interactions for GC14P071399 Gene

SuperPathways for GC14P071399 Gene

No Data Available

Interacting Proteins for GC14P071399 Gene

Gene Ontology (GO) - Biological Process for GC14P071399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC14P071399 Gene

Drugs & Compounds for GC14P071399 Gene

No Compound Related Data Available

Transcripts for GC14P071399 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC14P071399 Gene

No ASD Table

Relevant External Links for GC14P071399 Gene

GeneLoc Exon Structure for
GC14P071399

No data available for mRNA/cDNA for GC14P071399 Gene

Expression for GC14P071399 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC14P071399 Gene

Orthologs for GC14P071399 Gene

No data available for Orthologs and Evolution for GC14P071399 Gene

Paralogs for GC14P071399 Gene

No data available for Paralogs for GC14P071399 Gene

Variants for GC14P071399 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC14P071399 Gene

Disorders for GC14P071399 Gene

No disorders were found for GC14P071399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC14P071399 Gene

Publications for GC14P071399 Gene

  1. Purified box C/D snoRNPs are able to reproduce site-specific 2'-O-methylation of target RNA in vitro. (PMID: 12215523) Galardi S … Bozzoni I (Molecular and cellular biology 2002) 1

Products for GC14P071399 Gene

Sources for GC14P071399 Gene

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