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Aliases for GC13P048533 Gene

Subcategory (RNA class) for GC13P048533 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC13P048533 Gene

No Aliases found

ORGUL Members for GC13P048533 Gene

No data available for External Ids for GC13P048533 Gene

Summaries for GC13P048533 Gene

GeneCards Summary for GC13P048533 Gene

GC13P048533 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC13P048533 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC13P048533 Gene

Genomics for GC13P048533 Gene

GeneHancer (GH) Regulatory Elements for GC13P048533 Gene

Promoters and enhancers for GC13P048533 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J048530 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.8 -761 4.8 ZFX NKRF POLR2A ZNF121 ZNF687 NFIB AHR TFE3 ZBTB7A SP7 RCBTB2 ENSG00000274929 GC13P048532 GC13P048533 LINC00462 RB1 LPAR6
GH13J048535 Promoter/Enhancer 1.2 EPDnew Ensembl dbSUPER 0.7 +2.0 2039 0.4 RCBTB2 GC13P048533 LOC105370201 RB1
GH13J048561 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.5 28494 2.3 SP1 RELA CREM MLLT1 ZBED1 IKZF1 BACH1 IKZF2 TRIM22 CBFB RCBTB2 LPAR6 RB1 FNDC3A ITM2B CYSLTR2 LOC105370201 GC13P048533
GH13J048567 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +36.2 36199 5.9 ELF3 CEBPG SOX13 CEBPA SP1 RCOR2 PKNOX1 TCF7 FOXA2 YY1 LOC105370201 RB1 RCBTB2 LPAR6 RB1-DT FNDC3A LINC01077 GC13P048533
GH13J048542 Enhancer 0.8 ENCODE dbSUPER 0.4 +9.0 9048 1.5 ZNF547 RXRA SP1 POLR2A NR2F2 RAD21 ZNF335 HNF4A FEZF1 CTCF RB1 LINC00462 GC13P048533 LOC105370201
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC13P048533 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC13P048533 Gene

Genomic Locations for GC13P048533 Gene
chr13:48,533,762-48,588,979
(GRCh38/hg38)
Size:
55,218 bases
Orientation:
Plus strand

Genomic View for GC13P048533 Gene

Genes around GC13P048533 on UCSC Golden Path with GeneCards custom track

GC13P048533 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC13P048533 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC13P048533 Gene

Proteins for GC13P048533 Gene

Post-translational modifications for GC13P048533 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC13P048533 Gene

Domains & Families for GC13P048533 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC13P048533 Gene

Function for GC13P048533 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC13P048533 Gene

Localization for GC13P048533 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC13P048533 Gene

Pathways & Interactions for GC13P048533 Gene

PathCards logo

SuperPathways for GC13P048533 Gene

No Data Available

Interacting Proteins for GC13P048533 Gene

Gene Ontology (GO) - Biological Process for GC13P048533 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC13P048533 Gene

Drugs & Compounds for GC13P048533 Gene

No Compound Related Data Available

Transcripts for GC13P048533 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC13P048533 Gene

No ASD Table

Relevant External Links for GC13P048533 Gene

GeneLoc Exon Structure for
GC13P048533

No data available for mRNA/cDNA for GC13P048533 Gene

Expression for GC13P048533 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC13P048533 Gene

Orthologs for GC13P048533 Gene

No data available for Orthologs and Evolution for GC13P048533 Gene

Paralogs for GC13P048533 Gene

No data available for Paralogs for GC13P048533 Gene

Variants for GC13P048533 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC13P048533 Gene

Disorders for GC13P048533 Gene

No disorders were found for GC13P048533 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC13P048533 Gene

Publications for GC13P048533 Gene

No publications were found for GC13P048533 Gene.

No data available for External Links for GC13P048533 Gene

Products for GC13P048533 Gene

Sources for GC13P048533 Gene

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