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Aliases for GC13P044121 Gene

Subcategory (RNA class) for GC13P044121 Gene


Quality Score for this RNA gene is


Aliases for GC13P044121 Gene

No Aliases found

ORGUL Members for GC13P044121 Gene

No data available for External Ids for GC13P044121 Gene

Summaries for GC13P044121 Gene

GeneCards Summary for GC13P044121 Gene

GC13P044121 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC13P044121 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC13P044121

Additional gene information for GC13P044121 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC13P044121 Gene

Genomics for GC13P044121 Gene

GeneHancer (GH) Regulatory Elements for GC13P044121 Gene

Promoters and enhancers for GC13P044121 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J044121 Enhancer 0.2 ENCODE 650.7 +0.1 148 0.2 GC13P044121 SMIM2 SMIM2-IT1 SMIM2-AS1 LINC00390
GH13J044141 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.3 +21.4 21384 3.6 PKNOX1 ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF207 ZNF143 FOS SMIM2-AS1 LINC00390 SMIM2 GC13P044121
GH13J044116 Enhancer 0.4 Ensembl ENCODE 0.7 -3.7 -3683 1.9 SMIM2-IT1 SMIM2 GC13P044121 SMIM2-AS1 LINC00390
GH13J044132 Enhancer 0.7 Ensembl ENCODE 0.4 +11.9 11935 1.1 JUND EGR1 JUN GABPB1 FOS GABPA EGR2 SMIM2-IT1 SMIM2 GC13P044121 LINC00390 SMIM2-AS1
GH13J044140 Enhancer 0.6 ENCODE 0.4 +19.3 19268 0.2 FOXA2 SP5 FOXA3 MNT ZIC2 FOXA1 ZNF335 CTBP1 GATA3 ZNF610 SMIM2 LINC00390 GC13P044121 SMIM2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC13P044121 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC13P044121 Gene

Genomic Locations for GC13P044121 Gene
235 bases
Plus strand

Genomic View for GC13P044121 Gene

Genes around GC13P044121 on UCSC Golden Path with GeneCards custom track

GC13P044121 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC13P044121 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC13P044121 Gene

ORGUL Member Location for GC13P044121 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC13P044121 Gene

Proteins for GC13P044121 Gene

Post-translational modifications for GC13P044121 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC13P044121 Gene

Domains & Families for GC13P044121 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC13P044121 Gene

Function for GC13P044121 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC13P044121 Gene

Localization for GC13P044121 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC13P044121 Gene

Pathways & Interactions for GC13P044121 Gene

SuperPathways for GC13P044121 Gene

No Data Available

Interacting Proteins for GC13P044121 Gene

Gene Ontology (GO) - Biological Process for GC13P044121 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC13P044121 Gene

Drugs & Compounds for GC13P044121 Gene

No Compound Related Data Available

Transcripts for GC13P044121 Gene

fRNAdb Secondary structures for GC13P044121 Gene

  • FR035750
  • FR057838

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC13P044121 Gene

No ASD Table

Relevant External Links for GC13P044121 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC13P044121 Gene

Expression for GC13P044121 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC13P044121 Gene

Orthologs for GC13P044121 Gene

No data available for Orthologs and Evolution for GC13P044121 Gene

Paralogs for GC13P044121 Gene

No data available for Paralogs for GC13P044121 Gene

Variants for GC13P044121 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC13P044121 Gene

Disorders for GC13P044121 Gene

No disorders were found for GC13P044121 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC13P044121 Gene

Publications for GC13P044121 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC13P044121 Gene

Sources for GC13P044121 Gene

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