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Aliases for GC13P031608 Gene

Subcategory (RNA class) for GC13P031608 Gene

piRNA

Quality Score for this RNA gene is

16

Aliases for GC13P031608 Gene

No Aliases found

ORGUL Members for GC13P031608 Gene

No data available for External Ids for GC13P031608 Gene

Summaries for GC13P031608 Gene

GeneCards Summary for GC13P031608 Gene

GC13P031608 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC13P031608 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC13P031608

Additional gene information for GC13P031608 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC13P031608 Gene

Genomics for GC13P031608 Gene

GeneHancer (GH) Regulatory Elements for GC13P031608 Gene

Promoters and enhancers for GC13P031608 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I031604 Enhancer 0.6 ENCODE 0.8 -3.1 -3100 1 PKNOX1 CEBPB MAFG ZNF384 ZNF316 MAFF POLR2A EMSY MAFK HMGB1 RXFP2 GC13P031608 ENSG00000277319
GH13I031638 Enhancer 0.7 FANTOM5 ENCODE 0.3 +30.2 30168 1.1 ATF4 JUND JUN RXFP2 GC13P031608
GH13I031586 Enhancer 0.4 ENCODE 0.4 -19.9 -19887 3.8 JUND POLR2A REST RXFP2 TEX26 GC13P031608 ENSG00000277319
GH13I031628 Enhancer 0.5 Ensembl ENCODE 0.3 +20.9 20888 0.9 MAX GC13P031608 RXFP2
GH13I031630 Enhancer 0.4 ENCODE 0.3 +23.1 23085 1.4 MAX MYC GC13P031608 RXFP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC13P031608 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC13P031608 Gene

Genomic Locations for GC13P031608 Gene
chr13:31,608,550-31,608,588
(GRCh38/hg38)
Size:
39 bases
Orientation:
Plus strand

Genomic View for GC13P031608 Gene

Genes around GC13P031608 on UCSC Golden Path with GeneCards custom track

GC13P031608 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC13P031608 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC13P031608 Gene

ORGUL Member Location for GC13P031608 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC13P031608 Gene

Proteins for GC13P031608 Gene

Post-translational modifications for GC13P031608 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC13P031608 Gene

Domains & Families for GC13P031608 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC13P031608 Gene

Function for GC13P031608 Gene

Animal Model Products

miRNA for GC13P031608 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC13P031608 Gene

Localization for GC13P031608 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC13P031608 Gene

Pathways & Interactions for GC13P031608 Gene

SuperPathways for GC13P031608 Gene

No Data Available

Interacting Proteins for GC13P031608 Gene

Gene Ontology (GO) - Biological Process for GC13P031608 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC13P031608 Gene

Drugs & Compounds for GC13P031608 Gene

No Compound Related Data Available

Transcripts for GC13P031608 Gene

fRNAdb Secondary structures for GC13P031608 Gene

  • FR244151
  • FR036964

Alternative Splicing Database (ASD) splice patterns (SP) for GC13P031608 Gene

No ASD Table

Relevant External Links for GC13P031608 Gene

GeneLoc Exon Structure for
GC13P031608

No data available for mRNA/cDNA for GC13P031608 Gene

Expression for GC13P031608 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC13P031608 Gene

Orthologs for GC13P031608 Gene

No data available for Orthologs and Evolution for GC13P031608 Gene

Paralogs for GC13P031608 Gene

No data available for Paralogs for GC13P031608 Gene

Variants for GC13P031608 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC13P031608 Gene

Disorders for GC13P031608 Gene

No disorders were found for GC13P031608 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC13P031608 Gene

Publications for GC13P031608 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC13P031608 Gene

Sources for GC13P031608 Gene

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