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Aliases for GC13P029586 Gene

Subcategory (RNA class) for GC13P029586 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC13P029586 Gene

No Aliases found

ORGUL Members for GC13P029586 Gene

No data available for External Ids for GC13P029586 Gene

Summaries for GC13P029586 Gene

GeneCards Summary for GC13P029586 Gene

GC13P029586 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC13P029586 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC13P029586

Additional gene information for GC13P029586 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC13P029586 Gene

Genomics for GC13P029586 Gene

GeneHancer (GH) Regulatory Elements for GC13P029586 Gene

Promoters and enhancers for GC13P029586 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J029586 Enhancer 0.4 dbSUPER 650.7 +0.5 476 1.5 ZFHX2 ZNF146 EGR1 GC13P029586 SLC7A1
GH13J029584 Enhancer 0.2 dbSUPER 650.7 -1.3 -1330 1.2 GC13P029586 SLC7A1 PIR32808
GH13J029592 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 +7.8 7779 3.7 ATF1 FOXA2 SMAD1 ARID4B SIN3A DMAP1 BRCA1 ETS1 YY1 ZNF121 SLC7A1 GC13P029586
GH13J029580 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -4.2 -4230 3.4 STAT1 BACH1 MAFG CBFA2T3 ZIC2 ZKSCAN1 ZFHX2 JUND ZNF316 ZNF366 MTUS2-AS1 MTUS2 UBL3 GC13P029586 PIR32808 SLC7A1
GH13J029588 Enhancer 0.7 ENCODE dbSUPER 0.7 +2.7 2730 1.8 CTCF GLIS1 ZIC2 RAD21 GC13P029586 SLC7A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC13P029586 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC13P029586 Gene

Genomic Locations for GC13P029586 Gene
chr13:29,586,833-29,587,152
(GRCh38/hg38)
Size:
320 bases
Orientation:
Plus strand

Genomic View for GC13P029586 Gene

Genes around GC13P029586 on UCSC Golden Path with GeneCards custom track

GC13P029586 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC13P029586 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC13P029586 Gene

ORGUL Member Location for GC13P029586 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC13P029586 Gene

Proteins for GC13P029586 Gene

Post-translational modifications for GC13P029586 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC13P029586 Gene

Domains & Families for GC13P029586 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC13P029586 Gene

Function for GC13P029586 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC13P029586 Gene

Localization for GC13P029586 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC13P029586 Gene

Pathways & Interactions for GC13P029586 Gene

SuperPathways for GC13P029586 Gene

No Data Available

Interacting Proteins for GC13P029586 Gene

Gene Ontology (GO) - Biological Process for GC13P029586 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC13P029586 Gene

Drugs & Compounds for GC13P029586 Gene

No Compound Related Data Available

Transcripts for GC13P029586 Gene

fRNAdb Secondary structures for GC13P029586 Gene

  • FR295682
  • FR255180

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC13P029586 Gene

No ASD Table

Relevant External Links for GC13P029586 Gene

GeneLoc Exon Structure for
GC13P029586

No data available for mRNA/cDNA for GC13P029586 Gene

Expression for GC13P029586 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC13P029586 Gene

Orthologs for GC13P029586 Gene

No data available for Orthologs and Evolution for GC13P029586 Gene

Paralogs for GC13P029586 Gene

No data available for Paralogs for GC13P029586 Gene

Variants for GC13P029586 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC13P029586 Gene

Disorders for GC13P029586 Gene

No disorders were found for GC13P029586 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC13P029586 Gene

Publications for GC13P029586 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC13P029586 Gene

Sources for GC13P029586 Gene

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