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Aliases for GC12P056591 Gene

Subcategory (RNA class) for GC12P056591 Gene

lncRNA

Quality Score for this RNA gene is

19

Aliases for GC12P056591 Gene

No Aliases found

No data available for External Ids for GC12P056591 Gene

Summaries for GC12P056591 Gene

GeneCards Summary for GC12P056591 Gene

GC12P056591 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC12P056591 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC12P056591

Additional gene information for GC12P056591 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12P056591 Gene

Genomics for GC12P056591 Gene

GeneHancer (GH) Regulatory Elements for GC12P056591 Gene

Promoters and enhancers for GC12P056591 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J056591 Enhancer 1 Ensembl ENCODE 600.7 +2.0 1987 4.1 CTCF ZNF121 RAD21 CREB1 PKNOX1 ATF1 ZNF143 REST ZNF629 POLR2A GC12P056591 GC12P056594 BAZ2A RBMS2 GLS2 SPRYD4 APOF STAT2 NACA PTGES3
GH12J056631 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +43.7 43746 7 HDGF SP1 ZFX CC2D1A ELF3 CTCF ZNF148 NKRF MLLT1 CEBPG BAZ2A IKZF4 ENSG00000257740 SMARCC2 ANKRD52 SLC26A10 ENSG00000224713 DTX3 ARHGEF25 PAN2
GH12J056628 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 0.3 +38.5 38549 3 ZNF652 SP1 ZFX CC2D1A ELF3 MNT ZNF148 NKRF MLLT1 CEBPG ANKRD52 IKZF4 ENSG00000257740 RBMS2 RNU6-343P PTGES3 NEMP1 SMARCC2 R3HDM2 SLC26A10
GH12J056622 Enhancer 0.5 dbSUPER 0.3 +31.7 31662 1 MAFK ZNF316 SCRT1 MAFG EMSY RNU6-343P ATP5F1B SNORD59B SNORD59A RBMS2 GLS2 BAZ2A GC12P056591 GC12P056594
GH12J056596 Enhancer 0.3 ENCODE 0.4 +5.8 5820 1 GLIS1 BAZ2A GLS2 RBMS2 SPRYD4 APOF STAT2 NACA GC12P056591 GC12P056594
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12P056591 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12P056591 Gene

Genomic Locations for GC12P056591 Gene
chr12:56,591,130-56,591,929
(GRCh38/hg38)
Size:
800 bases
Orientation:
Plus strand

Genomic View for GC12P056591 Gene

Genes around GC12P056591 on UCSC Golden Path with GeneCards custom track

GC12P056591 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12P056591 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC12P056591 Gene

ORGUL Member Location for GC12P056591 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC12P056591 Gene

Proteins for GC12P056591 Gene

Post-translational modifications for GC12P056591 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12P056591 Gene

Domains & Families for GC12P056591 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12P056591 Gene

Function for GC12P056591 Gene

Phenotypes From GWAS Catalog for GC12P056591 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12P056591 Gene

Localization for GC12P056591 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12P056591 Gene

Pathways & Interactions for GC12P056591 Gene

PathCards logo

SuperPathways for GC12P056591 Gene

No Data Available

Interacting Proteins for GC12P056591 Gene

Gene Ontology (GO) - Biological Process for GC12P056591 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12P056591 Gene

Drugs & Compounds for GC12P056591 Gene

No Compound Related Data Available

Transcripts for GC12P056591 Gene

fRNAdb Secondary structures for GC12P056591 Gene

  • FR142128

Alternative Splicing Database (ASD) splice patterns (SP) for GC12P056591 Gene

No ASD Table

Relevant External Links for GC12P056591 Gene

GeneLoc Exon Structure for
GC12P056591

No data available for mRNA/cDNA for GC12P056591 Gene

Expression for GC12P056591 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12P056591 Gene

Orthologs for GC12P056591 Gene

No data available for Orthologs and Evolution for GC12P056591 Gene

Paralogs for GC12P056591 Gene

No data available for Paralogs for GC12P056591 Gene

Variants for GC12P056591 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12P056591 Gene

Disorders for GC12P056591 Gene

No disorders were found for GC12P056591 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12P056591 Gene

Publications for GC12P056591 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC12P056591 Gene

Products for GC12P056591 Gene

Sources for GC12P056591 Gene

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