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Aliases for GC12P053210 Gene

Subcategory (RNA class) for GC12P053210 Gene


Quality Score for this RNA gene is


Aliases for GC12P053210 Gene

No Aliases found

ORGUL Members for GC12P053210 Gene

No data available for External Ids for GC12P053210 Gene

Summaries for GC12P053210 Gene

GeneCards Summary for GC12P053210 Gene

GC12P053210 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC12P053210 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC12P053210

Additional gene information for GC12P053210 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12P053210 Gene

Genomics for GC12P053210 Gene

GeneHancer (GH) Regulatory Elements for GC12P053210 Gene

Promoters and enhancers for GC12P053210 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J053211 Enhancer 0.9 Ensembl dbSUPER 600.7 +1.6 1613 0.8 CTCF REST ZSCAN4 MGA CTBP1 RAD21 SMC3 PHF20 ZNF592 ZNF143 GC12P053210 RARG
GH12J053205 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.7 -3.0 -2954 4.9 SP1 ZNF148 NKRF ZNF121 POLR2A ZNF687 RELA CREM PRDM1 MLLT1 ITGB7 GC12P053210
GH12J053215 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.4 10357 10.1 SP1 CC2D1A ZFX ELF3 ZNF148 NKRF MLLT1 CEBPG GTF2F1 ZNF687 RARG ITGB7 MAP3K12 TNS2 SP1 IGFBP6 PFDN5 C12orf10 TARBP2 ZNF740
GH12J053214 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.1 4126 0.6 SP1 RXRA ETS1 POLR2A GC12P053210 RARG
GH12J053213 Enhancer 1.1 ENCODE dbSUPER 0.7 +2.9 2935 0.2 CC2D1A CTCF MLLT1 CDC5L YY1 SP7 KLF14 RAD21 IKZF1 GLIS2 ZNF740 TARBP2 NPFF CSAD GC12P053210 RARG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12P053210 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12P053210 Gene

Genomic Locations for GC12P053210 Gene
494 bases
Plus strand

Genomic View for GC12P053210 Gene

Genes around GC12P053210 on UCSC Golden Path with GeneCards custom track

GC12P053210 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12P053210 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC12P053210 Gene

ORGUL Member Location for GC12P053210 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC12P053210 Gene

Proteins for GC12P053210 Gene

Post-translational modifications for GC12P053210 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12P053210 Gene

Domains & Families for GC12P053210 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12P053210 Gene

Function for GC12P053210 Gene

Phenotypes From GWAS Catalog for GC12P053210 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12P053210 Gene

Localization for GC12P053210 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12P053210 Gene

Pathways & Interactions for GC12P053210 Gene

PathCards logo

SuperPathways for GC12P053210 Gene

No Data Available

Interacting Proteins for GC12P053210 Gene

Gene Ontology (GO) - Biological Process for GC12P053210 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC12P053210 Gene

Drugs & Compounds for GC12P053210 Gene

No Compound Related Data Available

Transcripts for GC12P053210 Gene

fRNAdb Secondary structures for GC12P053210 Gene

  • FR180360

Alternative Splicing Database (ASD) splice patterns (SP) for GC12P053210 Gene

No ASD Table

Relevant External Links for GC12P053210 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC12P053210 Gene

Expression for GC12P053210 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12P053210 Gene

Orthologs for GC12P053210 Gene

No data available for Orthologs and Evolution for GC12P053210 Gene

Paralogs for GC12P053210 Gene

No data available for Paralogs for GC12P053210 Gene

Variants for GC12P053210 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12P053210 Gene

Disorders for GC12P053210 Gene

No disorders were found for GC12P053210 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12P053210 Gene

Publications for GC12P053210 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC12P053210 Gene

Products for GC12P053210 Gene

Sources for GC12P053210 Gene

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