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Aliases for GC12P051831 Gene

Subcategory (RNA class) for GC12P051831 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC12P051831 Gene

No Aliases found

ORGUL Members for GC12P051831 Gene

No data available for External Ids for GC12P051831 Gene

Summaries for GC12P051831 Gene

GeneCards Summary for GC12P051831 Gene

GC12P051831 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC12P051831 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC12P051831

Additional gene information for GC12P051831 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12P051831 Gene

Genomics for GC12P051831 Gene

GeneHancer (GH) Regulatory Elements for GC12P051831 Gene

Promoters and enhancers for GC12P051831 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J051827 Enhancer 1 Ensembl ENCODE 650.7 -0.5 -479 2.2 HDAC1 PKNOX1 KLF17 KLF14 BATF ZNF335 GATA2 EGR1 ZNF366 FOS GC12P051831 GC12P051832 GC12P051835 GC12P051836 GC12P051837 GC12P051838 ENSG00000260473 ENSG00000261586 FIGNL2
GH12J051820 Promoter/Enhancer 1.2 Ensembl ENCODE 0.4 -7.9 -7943 1.6 GTF2F1 CTCF NFIB SIN3A ZIC2 RFX5 YY1 HIC1 ZNF335 E2F1 ENSG00000261586 GC12P051831 ENSG00000260473 FIGNL2
GH12J051818 Enhancer 0.7 Ensembl ENCODE 0.4 -10.1 -10133 0.7 ZFHX2 NFIC POLR2A GLIS1 KLF9 ZNF398 EGR2 ENSG00000261586 ENSG00000260473 GC12P051831 FIGNL2
GH12J051824 Enhancer 0.6 ENCODE 0.4 -5.0 -5015 0.2 CTCF ZNF654 RB1 REST ZEB2 ZBTB8A ZNF2 RAD21 ZEB1 CTBP1 ENSG00000260473 GC12P051831 ENSG00000261586 FIGNL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12P051831 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12P051831 Gene

Genomic Locations for GC12P051831 Gene
chr12:51,829,127-51,829,283
(GRCh38/hg38)
Size:
157 bases
Orientation:
Plus strand

Genomic View for GC12P051831 Gene

Genes around GC12P051831 on UCSC Golden Path with GeneCards custom track

GC12P051831 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12P051831 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC12P051831 Gene

ORGUL Member Location for GC12P051831 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC12P051831 Gene

Proteins for GC12P051831 Gene

Post-translational modifications for GC12P051831 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12P051831 Gene

Domains & Families for GC12P051831 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12P051831 Gene

Function for GC12P051831 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12P051831 Gene

Localization for GC12P051831 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12P051831 Gene

Pathways & Interactions for GC12P051831 Gene

SuperPathways for GC12P051831 Gene

No Data Available

Interacting Proteins for GC12P051831 Gene

Gene Ontology (GO) - Biological Process for GC12P051831 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12P051831 Gene

Drugs & Compounds for GC12P051831 Gene

No Compound Related Data Available

Transcripts for GC12P051831 Gene

fRNAdb Secondary structures for GC12P051831 Gene

  • FR073116
  • FR389921

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC12P051831 Gene

No ASD Table

Relevant External Links for GC12P051831 Gene

GeneLoc Exon Structure for
GC12P051831

No data available for mRNA/cDNA for GC12P051831 Gene

Expression for GC12P051831 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12P051831 Gene

Orthologs for GC12P051831 Gene

No data available for Orthologs and Evolution for GC12P051831 Gene

Paralogs for GC12P051831 Gene

No data available for Paralogs for GC12P051831 Gene

Variants for GC12P051831 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12P051831 Gene

Disorders for GC12P051831 Gene

No disorders were found for GC12P051831 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12P051831 Gene

Publications for GC12P051831 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC12P051831 Gene

Sources for GC12P051831 Gene

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