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Aliases for GC12M123283 Gene

Subcategory (RNA class) for GC12M123283 Gene


Quality Score for this RNA gene is


Aliases for GC12M123283 Gene

No Aliases found

ORGUL Members for GC12M123283 Gene

No data available for External Ids for GC12M123283 Gene

Summaries for GC12M123283 Gene

GeneCards Summary for GC12M123283 Gene

GC12M123283 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC12M123283 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC12M123283 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M123283 Gene

Genomics for GC12M123283 Gene

GeneHancer (GH) Regulatory Elements for GC12M123283 Gene

Promoters and enhancers for GC12M123283 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J123280 Enhancer 0.3 Ensembl 600.7 +1.8 1833 0.8 ZNF316 GC12M123283 RNA5SP375 CDK2AP1 C12orf65 DDX55 SNORA9B RILPL1
GH12J123283 Enhancer 0.2 Ensembl 600.7 -0.7 -667 0.6 GC12M123283 RNA5SP375 MPHOSPH9 SBNO1-AS1 CDK2AP1 C12orf65 RILPL1 GC12M123290
GH12J123287 Enhancer 0.4 Ensembl ENCODE 0.7 -4.0 -3967 0.8 CDK2AP1 MPHOSPH9 SBNO1-AS1 C12orf65 RILPL1 GC12M123283 GC12M123290 RNA5SP375
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M123283 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M123283 Gene

Genomic Locations for GC12M123283 Gene
120 bases
Minus strand

Genomic View for GC12M123283 Gene

Genes around GC12M123283 on UCSC Golden Path with GeneCards custom track

GC12M123283 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M123283 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M123283 Gene

Proteins for GC12M123283 Gene

Post-translational modifications for GC12M123283 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M123283 Gene

Domains & Families for GC12M123283 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M123283 Gene

Function for GC12M123283 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M123283 Gene

Localization for GC12M123283 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M123283 Gene

Pathways & Interactions for GC12M123283 Gene

PathCards logo

SuperPathways for GC12M123283 Gene

No Data Available

Interacting Proteins for GC12M123283 Gene

Gene Ontology (GO) - Biological Process for GC12M123283 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC12M123283 Gene

Drugs & Compounds for GC12M123283 Gene

No Compound Related Data Available

Transcripts for GC12M123283 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M123283 Gene

No ASD Table

Relevant External Links for GC12M123283 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC12M123283 Gene

Expression for GC12M123283 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M123283 Gene

Orthologs for GC12M123283 Gene

No data available for Orthologs and Evolution for GC12M123283 Gene

Paralogs for GC12M123283 Gene

No data available for Paralogs for GC12M123283 Gene

Variants for GC12M123283 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M123283 Gene

Disorders for GC12M123283 Gene

No disorders were found for GC12M123283 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M123283 Gene

Publications for GC12M123283 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

No data available for External Links for GC12M123283 Gene

Products for GC12M123283 Gene

Sources for GC12M123283 Gene

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