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Aliases for GC12M117408 Gene

Subcategory (RNA class) for GC12M117408 Gene

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Quality Score for this RNA gene is

6

Aliases for GC12M117408 Gene

No Aliases found

ORGUL Members for GC12M117408 Gene

No data available for External Ids for GC12M117408 Gene

Summaries for GC12M117408 Gene

GeneCards Summary for GC12M117408 Gene

GC12M117408 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC12M117408 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC12M117408

Additional gene information for GC12M117408 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M117408 Gene

Genomics for GC12M117408 Gene

GeneHancer (GH) Regulatory Elements for GC12M117408 Gene

Promoters and enhancers for GC12M117408 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I117407 Enhancer 0.5 ENCODE 550.8 +0.3 324 1.2 ZFHX2 HNF4A ZFX RAD21 GABPA EGR2 GC12M117408 GC12M117409 NOS1 ENSG00000255686 GC12M117361 GC12M117362
GH12I117434 Enhancer 0.6 FANTOM5 0.3 -25.7 -25732 0.5 SREBF1 HDGF ZFHX2 ZNF680 ZNF512B YBX1 EGR2 NOS1 GC12M117440 GC12M117439 GC12M117408 GC12M117409
GH12I117367 Enhancer 0.6 ENCODE 0.3 +41.2 41162 0.1 CTCF STAT1 ZNF654 TRIM22 ELF1 RAD21 ZNF143 ZNF444 SPI1 GC12M117362 GC12M117361 GC12M117408 GC12M117409 NOS1
GH12I117368 Enhancer 0.6 ENCODE 0.3 +41.4 41362 0.2 CTCF STAT1 ZNF654 TRIM22 REST ELF1 RAD21 SMC3 ZNF143 ZNF444 GC12M117361 GC12M117362 GC12M117408 GC12M117409 NOS1
GH12I117362 Promoter 0.7 EPDnew 0.2 +46.9 46862 0.1 SUZ12 EZH2 NOS1 GC12M117361 GC12M117362 GC12M117408 GC12M117409
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC12M117408 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M117408 Gene

Genomic Locations for GC12M117408 Gene
chr12:117,408,515-117,408,583
(GRCh38/hg38)
Size:
69 bases
Orientation:
Minus strand

Genomic View for GC12M117408 Gene

Genes around GC12M117408 on UCSC Golden Path with GeneCards custom track

GC12M117408 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M117408 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC12M117408 Gene

ORGUL Member Location for GC12M117408 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M117408 Gene

Proteins for GC12M117408 Gene

Post-translational modifications for GC12M117408 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M117408 Gene

Domains & Families for GC12M117408 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M117408 Gene

Function for GC12M117408 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M117408 Gene

Localization for GC12M117408 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M117408 Gene

Pathways & Interactions for GC12M117408 Gene

SuperPathways for GC12M117408 Gene

No Data Available

Interacting Proteins for GC12M117408 Gene

Gene Ontology (GO) - Biological Process for GC12M117408 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M117408 Gene

Drugs & Compounds for GC12M117408 Gene

No Compound Related Data Available

Transcripts for GC12M117408 Gene

fRNAdb Secondary structures for GC12M117408 Gene

  • FR290094

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M117408 Gene

No ASD Table

Relevant External Links for GC12M117408 Gene

GeneLoc Exon Structure for
GC12M117408

No data available for mRNA/cDNA for GC12M117408 Gene

Expression for GC12M117408 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M117408 Gene

Orthologs for GC12M117408 Gene

No data available for Orthologs and Evolution for GC12M117408 Gene

Paralogs for GC12M117408 Gene

No data available for Paralogs for GC12M117408 Gene

Variants for GC12M117408 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M117408 Gene

Disorders for GC12M117408 Gene

No disorders were found for GC12M117408 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M117408 Gene

Publications for GC12M117408 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC12M117408 Gene

Sources for GC12M117408 Gene

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