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Aliases for GC12M116089 Gene

Subcategory (RNA class) for GC12M116089 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC12M116089 Gene

No Aliases found

ORGUL Members for GC12M116089 Gene

No data available for External Ids for GC12M116089 Gene

Summaries for GC12M116089 Gene

GeneCards Summary for GC12M116089 Gene

GC12M116089 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC12M116089 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M116089 Gene

Genomics for GC12M116089 Gene

GeneHancer (GH) Regulatory Elements for GC12M116089 Gene

Promoters and enhancers for GC12M116089 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J116111 Enhancer 0.7 Ensembl dbSUPER 600.7 +1.3 1280 6.8 ZNF680 PKNOX1 USF1 ZBTB17 GATA3 PRDM6 L3MBTL2 GC12M116089 GC12P116083 MED13L
GH12J116121 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.7 -6712 3.6 CC2D1A CBFA2T2 ZNF148 ZNF384 ZSCAN21 MAFK SP7 CREM PRDM1 MZF1 FBXW8 MAP1LC3B2 MED13L MIR620 ENSG00000258034 GC12M116089 GC12P116137
GH12J116132 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.1 -17127 0.4 ELF3 CEBPG SP1 PRDM1 KAT8 RXRA CEBPA GATAD2A RCOR2 FOXA2 MAP1LC3B2 MED13L GC12P116137 GC12M116089
GH12J116134 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.4 -19.9 -19900 2.3 NFIB ZNF384 ZNF600 ZEB2 MYNN NFIC JUND JUN FEZF1 FOS GC12P116137 MAP1LC3B2 MED13L GC12M116089
GH12J116088 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +28.1 28080 2.8 ZNF121 RUNX3 ATF2 BATF EGR2 GC12P116083 GC12M116089 MED13L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M116089 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M116089 Gene

Genomic Locations for GC12M116089 Gene
chr12:116,089,433-116,116,081
(GRCh38/hg38)
Size:
26,649 bases
Orientation:
Minus strand

Genomic View for GC12M116089 Gene

Genes around GC12M116089 on UCSC Golden Path with GeneCards custom track

GC12M116089 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M116089 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M116089 Gene

Proteins for GC12M116089 Gene

Post-translational modifications for GC12M116089 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M116089 Gene

Domains & Families for GC12M116089 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M116089 Gene

Function for GC12M116089 Gene

Phenotypes From GWAS Catalog for GC12M116089 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M116089 Gene

Localization for GC12M116089 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M116089 Gene

Pathways & Interactions for GC12M116089 Gene

PathCards logo

SuperPathways for GC12M116089 Gene

No Data Available

Interacting Proteins for GC12M116089 Gene

Gene Ontology (GO) - Biological Process for GC12M116089 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M116089 Gene

Drugs & Compounds for GC12M116089 Gene

No Compound Related Data Available

Transcripts for GC12M116089 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M116089 Gene

No ASD Table

Relevant External Links for GC12M116089 Gene

GeneLoc Exon Structure for
GC12M116089

No data available for mRNA/cDNA for GC12M116089 Gene

Expression for GC12M116089 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M116089 Gene

Orthologs for GC12M116089 Gene

No data available for Orthologs and Evolution for GC12M116089 Gene

Paralogs for GC12M116089 Gene

No data available for Paralogs for GC12M116089 Gene

Variants for GC12M116089 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M116089 Gene

Disorders for GC12M116089 Gene

No disorders were found for GC12M116089 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M116089 Gene

Publications for GC12M116089 Gene

No publications were found for GC12M116089 Gene.

No data available for External Links for GC12M116089 Gene

Products for GC12M116089 Gene

Sources for GC12M116089 Gene

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