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Aliases for GC12M113725 Gene

Subcategory (RNA class) for GC12M113725 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for GC12M113725 Gene

No Aliases found

ORGUL Members for GC12M113725 Gene

No data available for External Ids for GC12M113725 Gene

Summaries for GC12M113725 Gene

GeneCards Summary for GC12M113725 Gene

GC12M113725 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC12M113725 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC12M113725 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M113725 Gene

Genomics for GC12M113725 Gene

GeneHancer (GH) Regulatory Elements for GC12M113725 Gene

Promoters and enhancers for GC12M113725 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J113727 Enhancer 0.7 Ensembl ENCODE 600.7 -1.8 -1776 0.9 SOX13 SP1 FOXA2 FOSL2 JUND FOS GC12M113725 GC12M113726 LINC01234
GH12J113772 Promoter/Enhancer 1.4 Ensembl ENCODE 0.3 -47.5 -47461 1.5 CC2D1A CBFA2T2 ZNF384 MAFK ELF1 POLR2A IKZF1 ZNF512 ATF1 REST LINC01234 RBM19 GC12M113725 GC12M113726
GH12J113720 Enhancer 0.5 Ensembl 0.7 +4.9 4912 0.6 ZBTB17 ZNF664 ZNF398 NFXL1 GC12M113725 GC12M113726 GC12M113676 LINC01234
GH12J113767 Enhancer 1.1 Ensembl ENCODE 0.3 -40.7 -40688 1.8 ZNF473 ELF3 RERE SP1 PPARG HNF1A SP5 FOSL2 PRDM10 GATAD2A RBM19 LINC01234 GC12M113725 GC12M113726
GH12J113739 Enhancer 0.6 Ensembl 0.4 -14.7 -14688 2.6 CBFA2T2 EHMT2 USF1 USF2 PHF20 ZNF518A CHAMP1 ZNF354B SREBF1 RBM19 GC12M113726 GC12M113725 LINC01234
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M113725 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M113725 Gene

Genomic Locations for GC12M113725 Gene
chr12:113,725,811-113,726,013
(GRCh38/hg38)
Size:
203 bases
Orientation:
Minus strand

Genomic View for GC12M113725 Gene

Genes around GC12M113725 on UCSC Golden Path with GeneCards custom track

GC12M113725 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M113725 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M113725 Gene

Proteins for GC12M113725 Gene

Post-translational modifications for GC12M113725 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M113725 Gene

Domains & Families for GC12M113725 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M113725 Gene

Function for GC12M113725 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M113725 Gene

Localization for GC12M113725 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M113725 Gene

Pathways & Interactions for GC12M113725 Gene

PathCards logo

SuperPathways for GC12M113725 Gene

No Data Available

Interacting Proteins for GC12M113725 Gene

Gene Ontology (GO) - Biological Process for GC12M113725 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M113725 Gene

Drugs & Compounds for GC12M113725 Gene

No Compound Related Data Available

Transcripts for GC12M113725 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M113725 Gene

No ASD Table

Relevant External Links for GC12M113725 Gene

GeneLoc Exon Structure for
GC12M113725

No data available for mRNA/cDNA for GC12M113725 Gene

Expression for GC12M113725 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M113725 Gene

Orthologs for GC12M113725 Gene

No data available for Orthologs and Evolution for GC12M113725 Gene

Paralogs for GC12M113725 Gene

No data available for Paralogs for GC12M113725 Gene

Variants for GC12M113725 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M113725 Gene

Disorders for GC12M113725 Gene

No disorders were found for GC12M113725 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M113725 Gene

Publications for GC12M113725 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC12M113725 Gene

Products for GC12M113725 Gene

Sources for GC12M113725 Gene

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