Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC12M113308 Gene

Subcategory (RNA class) for GC12M113308 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC12M113308 Gene

No Aliases found

ORGUL Members for GC12M113308 Gene

No data available for External Ids for GC12M113308 Gene

Summaries for GC12M113308 Gene

GeneCards Summary for GC12M113308 Gene

GC12M113308 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC12M113308 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M113308 Gene

Genomics for GC12M113308 Gene

GeneHancer (GH) Regulatory Elements for GC12M113308 Gene

Promoters and enhancers for GC12M113308 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J113333 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -16.5 -16507 3.2 SP1 ZFX ZKSCAN8 NKRF ZNF121 ZNF687 BACH1 SP7 POLR2A SP5 SLC8B1 RBM19 PLBD2 RPL6 GC12M113308
GH12J113312 Enhancer 0.8 ENCODE 0.7 +5.0 4983 0.2 CC2D1A CTCF MAFK RAD21 ZBTB33 ARID2 ZNF600 ZNF143 REST TRIM22 GC12M113308 GC12P113300 SLC8B1
GH12J113322 Enhancer 0.7 Ensembl ENCODE 0.7 -5.0 -4983 1.4 MAFK ZNF316 ZNF37A MAFG NR2F1 BCOR EMSY TPCN1 GC12M113308 SLC8B1 PLBD2
GH12J113303 Enhancer 0.9 Ensembl ENCODE 0.4 +14.6 14593 1.4 MLLT1 SMARCA4 ZSCAN4 ZNF776 MTA2 NRF1 SOX6 MCM3 ZNF318 FOSL1 RBM19 DDX54 RASAL1 GC12P113300 GC12M113308 SLC8B1
GH12J113325 Enhancer 0.8 Ensembl ENCODE 0.4 -8.8 -8806 2.2 SP1 NFE2 NR2F2 SMARCA5 CTCF RXRA ZBTB33 ZMYM3 PLBD2 IQCD TPCN1 GC12M113308 SLC8B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M113308 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M113308 Gene

Genomic Locations for GC12M113308 Gene
chr12:113,308,901-113,317,694
(GRCh38/hg38)
Size:
8,794 bases
Orientation:
Minus strand

Genomic View for GC12M113308 Gene

Genes around GC12M113308 on UCSC Golden Path with GeneCards custom track

GC12M113308 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M113308 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M113308 Gene

Proteins for GC12M113308 Gene

Post-translational modifications for GC12M113308 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M113308 Gene

Domains & Families for GC12M113308 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M113308 Gene

Function for GC12M113308 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M113308 Gene

Localization for GC12M113308 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M113308 Gene

Pathways & Interactions for GC12M113308 Gene

PathCards logo

SuperPathways for GC12M113308 Gene

No Data Available

Interacting Proteins for GC12M113308 Gene

Gene Ontology (GO) - Biological Process for GC12M113308 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M113308 Gene

Drugs & Compounds for GC12M113308 Gene

No Compound Related Data Available

Transcripts for GC12M113308 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M113308 Gene

No ASD Table

Relevant External Links for GC12M113308 Gene

GeneLoc Exon Structure for
GC12M113308

No data available for mRNA/cDNA for GC12M113308 Gene

Expression for GC12M113308 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M113308 Gene

Orthologs for GC12M113308 Gene

No data available for Orthologs and Evolution for GC12M113308 Gene

Paralogs for GC12M113308 Gene

No data available for Paralogs for GC12M113308 Gene

Variants for GC12M113308 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M113308 Gene

Disorders for GC12M113308 Gene

No disorders were found for GC12M113308 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M113308 Gene

Publications for GC12M113308 Gene

No publications were found for GC12M113308 Gene.

No data available for External Links for GC12M113308 Gene

Products for GC12M113308 Gene

Sources for GC12M113308 Gene

Content
Loading form....