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Aliases for GC12M104578 Gene

Subcategory (RNA class) for GC12M104578 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC12M104578 Gene

No Aliases found

ORGUL Members for GC12M104578 Gene

No data available for External Ids for GC12M104578 Gene

Summaries for GC12M104578 Gene

GeneCards Summary for GC12M104578 Gene

GC12M104578 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC12M104578 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M104578 Gene

Genomics for GC12M104578 Gene

GeneHancer (GH) Regulatory Elements for GC12M104578 Gene

Promoters and enhancers for GC12M104578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J104587 Promoter/Enhancer 1.3 Ensembl ENCODE 600.7 +1.7 1689 2.1 MAFK SMARCA4 PKNOX1 ZNF316 CEBPB CHD2 SP1 NFE2 ZNF766 ATF3 GC12M104578 GC12P104580 CHST11
GH12J104585 Enhancer 0.9 ENCODE dbSUPER 0.7 +4.4 4357 1 ZNF548 PRDM1 ZBTB44 ZBTB20 ZNF10 ZNF157 OSR2 HDAC2 PRDM4 BCOR TDG WASHC4 GC12M104578 GC12P104580 CHST11
GH12J104576 Enhancer 1 ENCODE dbSUPER 0.4 +12.3 12295 2.9 CC2D1A ZKSCAN8 CBFA2T2 TRIM24 SMARCA4 GMEB1 DPF2 IKZF1 REST NR2C1 ENSG00000216285 GC12P104580 GC12M104578 GC12P104563 GC12P104553 CHST11
GH12J104584 Enhancer 0.8 ENCODE dbSUPER 0.4 +7.5 7456 1.3 RELA ZBED1 IKZF1 IKZF2 ZNF316 DPF2 RUNX3 ELF1 SMARCA5 EBF1 GC12P104580 GC12M104578 CHST11
GH12J104580 Enhancer 0.7 dbSUPER 0.4 +10.1 10111 0.6 JUND RELA CREM IKZF1 IKZF2 TRIM22 DPF2 EED RUNX3 BCL11A GC12P104580 GC12M104578 GC12P104563 GC12P104553 CHST11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M104578 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M104578 Gene

Genomic Locations for GC12M104578 Gene
chr12:104,578,760-104,590,572
(GRCh38/hg38)
Size:
11,813 bases
Orientation:
Minus strand

Genomic View for GC12M104578 Gene

Genes around GC12M104578 on UCSC Golden Path with GeneCards custom track

GC12M104578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M104578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M104578 Gene

Proteins for GC12M104578 Gene

Post-translational modifications for GC12M104578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M104578 Gene

Domains & Families for GC12M104578 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M104578 Gene

Function for GC12M104578 Gene

Phenotypes From GWAS Catalog for GC12M104578 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M104578 Gene

Localization for GC12M104578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M104578 Gene

Pathways & Interactions for GC12M104578 Gene

PathCards logo

SuperPathways for GC12M104578 Gene

No Data Available

Interacting Proteins for GC12M104578 Gene

Gene Ontology (GO) - Biological Process for GC12M104578 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M104578 Gene

Drugs & Compounds for GC12M104578 Gene

No Compound Related Data Available

Transcripts for GC12M104578 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M104578 Gene

No ASD Table

Relevant External Links for GC12M104578 Gene

GeneLoc Exon Structure for
GC12M104578

No data available for mRNA/cDNA for GC12M104578 Gene

Expression for GC12M104578 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M104578 Gene

Orthologs for GC12M104578 Gene

No data available for Orthologs and Evolution for GC12M104578 Gene

Paralogs for GC12M104578 Gene

No data available for Paralogs for GC12M104578 Gene

Variants for GC12M104578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M104578 Gene

Disorders for GC12M104578 Gene

No disorders were found for GC12M104578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M104578 Gene

Publications for GC12M104578 Gene

No publications were found for GC12M104578 Gene.

No data available for External Links for GC12M104578 Gene

Products for GC12M104578 Gene

Sources for GC12M104578 Gene

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