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Aliases for GC12M096423 Gene

Subcategory (RNA class) for GC12M096423 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for GC12M096423 Gene

No Aliases found

ORGUL Members for GC12M096423 Gene

No data available for External Ids for GC12M096423 Gene

Summaries for GC12M096423 Gene

GeneCards Summary for GC12M096423 Gene

GC12M096423 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC12M096423 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC12M096423 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M096423 Gene

Genomics for GC12M096423 Gene

GeneHancer (GH) Regulatory Elements for GC12M096423 Gene

Promoters and enhancers for GC12M096423 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J096486 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.1 +117.9 117925 3.6 ZFX CTCF NKRF CSDE1 MAFK YY1 SP7 CREM ZNF680 RAD21 CFAP54 NEDD1 CDK17 ELK3 SNRPF LTA4H ENSG00000258272 GC12M096423
GH12J096578 Enhancer 0.8 Ensembl ENCODE 0.3 +27.5 27464 1.4 ELF3 CTCF RAD21 REST TRIM22 ELF1 YY1 RFX5 SMC3 STAT1 GC12M096553 GC12M096423 CFAP54
GH12J096419 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.1 +180.7 180685 12.6 ZNF652 ZNF121 CEBPG ZNF548 PRDM1 ZNF404 MZF1 ZNF680 ZNF560 ZNF704 CDK17 RN7SKP11 ELK3 USP44 METAP2 CFAP54 SNRPF LTA4H GC12P096416 ENSG00000258272
GH12J096571 Enhancer 0.7 ENCODE 0.3 +35.2 35246 0.2 RELA CREM MLLT1 ZBED1 IKZF1 CREB1 IKZF2 TRIM22 CBFB DPF2 GC12M096553 GC12M096423 CFAP54
GH12J096516 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +90.0 89963 2 CTCF ELF3 RAD21 REST TRIM22 RUNX3 BCLAF1 DEK YY1 ZNF592 CFAP54 CDK17 LTA4H GC12M096553 GC12M096423
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M096423 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M096423 Gene

Genomic Locations for GC12M096423 Gene
chr12:96,423,954-96,606,564
(GRCh38/hg38)
Size:
182,611 bases
Orientation:
Minus strand

Genomic View for GC12M096423 Gene

Genes around GC12M096423 on UCSC Golden Path with GeneCards custom track

GC12M096423 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M096423 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M096423 Gene

Proteins for GC12M096423 Gene

Post-translational modifications for GC12M096423 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M096423 Gene

Domains & Families for GC12M096423 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M096423 Gene

Function for GC12M096423 Gene

Phenotypes From GWAS Catalog for GC12M096423 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M096423 Gene

Localization for GC12M096423 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M096423 Gene

Pathways & Interactions for GC12M096423 Gene

PathCards logo

SuperPathways for GC12M096423 Gene

No Data Available

Interacting Proteins for GC12M096423 Gene

Gene Ontology (GO) - Biological Process for GC12M096423 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M096423 Gene

Drugs & Compounds for GC12M096423 Gene

No Compound Related Data Available

Transcripts for GC12M096423 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M096423 Gene

No ASD Table

Relevant External Links for GC12M096423 Gene

GeneLoc Exon Structure for
GC12M096423

No data available for mRNA/cDNA for GC12M096423 Gene

Expression for GC12M096423 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M096423 Gene

Orthologs for GC12M096423 Gene

No data available for Orthologs and Evolution for GC12M096423 Gene

Paralogs for GC12M096423 Gene

No data available for Paralogs for GC12M096423 Gene

Variants for GC12M096423 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M096423 Gene

Disorders for GC12M096423 Gene

No disorders were found for GC12M096423 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M096423 Gene

Publications for GC12M096423 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and characterization of human non-coding RNAs with tissue-specific expression. (PMID: 17451645) Sasaki YT … Hirose T (Biochemical and biophysical research communications 2007) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC12M096423 Gene

Products for GC12M096423 Gene

Sources for GC12M096423 Gene

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