Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC12M096304 Gene

Subcategory (RNA class) for GC12M096304 Gene


Quality Score for this RNA gene is


Aliases for GC12M096304 Gene

No Aliases found

ORGUL Members for GC12M096304 Gene

No data available for External Ids for GC12M096304 Gene

Summaries for GC12M096304 Gene

GeneCards Summary for GC12M096304 Gene

GC12M096304 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC12M096304 Gene

  • U4_snRNA: U4 small nuclear RNA (U4 snRNA) is a component of the major U2-dependent spliceosome. It forms a duplex with U6, and with each splicing round, it is displaced from U6 (and the spliceosome) in an ATP-dependent manner, allowing U6 to refold and create the active site for splicing catalysis. A recycling process involving protein Prp24 re-anneals U4 and U6.

Additional gene information for GC12M096304 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M096304 Gene

Genomics for GC12M096304 Gene

GeneHancer (GH) Regulatory Elements for GC12M096304 Gene

Promoters and enhancers for GC12M096304 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J096302 Enhancer 0.3 Ensembl 600.7 +0.4 412 2.2 RAD21 GC12M096304 RNU4-24P CDK17 CFAP54 ENSG00000258177
GH12J096304 Enhancer 0.2 Ensembl 600.7 -1.3 -1287 0.8 GC12M096304 RNU4-24P CDK17 CFAP54 GC12P096320
GH12J096253 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +48.2 48235 2.7 CEBPG SP1 PKNOX1 RFX1 ZNF600 CEBPA GATAD2A ZNF7 FOXA2 FOXK2 CDK17 ELK3 ENSG00000258177 GC12M096304 RNU4-24P
GH12J096263 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +39.8 39805 1.1 ELF3 CBFA2T2 CEBPG RERE SP1 PPARG ZNF644 KAT8 HMG20B RXRA RNU4-24P CDK17 CFAP54 LTA4H ENSG00000258177 GC12M096304 ELK3
GH12J096315 Enhancer 0.9 ENCODE 0.4 -12.4 -12389 0.8 ZNF384 YY1 SP7 KLF14 EGR1 ZBTB8A ZNF600 ZEB2 PATZ1 ZNF692 GC12P096320 RNU4-24P GC12M096304 CDK17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M096304 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M096304 Gene

Genomic Locations for GC12M096304 Gene
140 bases
Minus strand
30 bases
Minus strand

Genomic View for GC12M096304 Gene

Genes around GC12M096304 on UCSC Golden Path with GeneCards custom track

GC12M096304 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M096304 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M096304 Gene

Proteins for GC12M096304 Gene

Post-translational modifications for GC12M096304 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M096304 Gene

Domains & Families for GC12M096304 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M096304 Gene

Function for GC12M096304 Gene

Phenotypes From GWAS Catalog for GC12M096304 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M096304 Gene

Localization for GC12M096304 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M096304 Gene

Pathways & Interactions for GC12M096304 Gene

PathCards logo

SuperPathways for GC12M096304 Gene

No Data Available

Interacting Proteins for GC12M096304 Gene

Gene Ontology (GO) - Biological Process for GC12M096304 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC12M096304 Gene

Drugs & Compounds for GC12M096304 Gene

No Compound Related Data Available

Transcripts for GC12M096304 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M096304 Gene

No ASD Table

Relevant External Links for GC12M096304 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC12M096304 Gene

Expression for GC12M096304 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M096304 Gene

Orthologs for GC12M096304 Gene

No data available for Orthologs and Evolution for GC12M096304 Gene

Paralogs for GC12M096304 Gene

No data available for Paralogs for GC12M096304 Gene

Variants for GC12M096304 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M096304 Gene

Disorders for GC12M096304 Gene

No disorders were found for GC12M096304 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M096304 Gene

Publications for GC12M096304 Gene

  1. Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment. (PMID: 11163207) Vidovic I … Ficner R (Molecular cell 2000) 1
  2. A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles. (PMID: 9452384) Raghunathan PL … Guthrie C (Science (New York, N.Y.) 1998) 1
  3. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  4. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

No data available for External Links for GC12M096304 Gene

Products for GC12M096304 Gene

Sources for GC12M096304 Gene

Loading form....