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Aliases for GC12M076540 Gene

Subcategory (RNA class) for GC12M076540 Gene

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Quality Score for this RNA gene is

13.2

Aliases for GC12M076540 Gene

No Aliases found

ORGUL Members for GC12M076540 Gene

No data available for External Ids for GC12M076540 Gene

Summaries for GC12M076540 Gene

GeneCards Summary for GC12M076540 Gene

GC12M076540 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC12M076540 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC12M076540

Additional gene information for GC12M076540 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M076540 Gene

Genomics for GC12M076540 Gene

GeneHancer (GH) Regulatory Elements for GC12M076540 Gene

Promoters and enhancers for GC12M076540 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J076531 Enhancer 0.9 Ensembl ENCODE 0.4 +10.5 10493 3.6 CBFA2T2 CEBPG ZNF644 ZNF680 CEBPA HDAC1 CEBPB ZSCAN5C OSR2 ARNT OSBPL8 BBS10 GC12M076540 GC12P076505
GH12J076551 Enhancer 0.8 ENCODE 0.4 -10.9 -10912 0.1 CC2D1A CBFA2T2 MLLT1 TRIM24 SMARCA4 DPF2 ZNF600 HDAC1 ZNF24 EP300 OSBPL8 GC12P076557 GC12M076540
GH12J076533 Enhancer 0.4 Ensembl ENCODE 0.4 +6.6 6593 1.8 GC12M076540 GC12P076505 OSBPL8
GH12J076547 Enhancer 0.4 ENCODE 0.4 -7.1 -7102 0.1 FEZF1 ZFP37 GC12M076540 GC12P076557 OSBPL8
GH12J076519 Enhancer 0.5 ENCODE 0.3 +21.0 20958 0.2 RUNX3 JUN GABPA ZBTB33 POLR2A GC12P076505 GC12M076540 OSBPL8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M076540 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M076540 Gene

Genomic Locations for GC12M076540 Gene
chr12:76,540,673-76,540,694
(GRCh38/hg38)
Size:
22 bases
Orientation:
Minus strand

Genomic View for GC12M076540 Gene

Genes around GC12M076540 on UCSC Golden Path with GeneCards custom track

GC12M076540 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M076540 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC12M076540 Gene

ORGUL Member Location for GC12M076540 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M076540 Gene

Proteins for GC12M076540 Gene

Post-translational modifications for GC12M076540 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M076540 Gene

Domains & Families for GC12M076540 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M076540 Gene

Function for GC12M076540 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M076540 Gene

Localization for GC12M076540 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M076540 Gene

Pathways & Interactions for GC12M076540 Gene

PathCards logo

SuperPathways for GC12M076540 Gene

No Data Available

Interacting Proteins for GC12M076540 Gene

Gene Ontology (GO) - Biological Process for GC12M076540 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M076540 Gene

Drugs & Compounds for GC12M076540 Gene

No Compound Related Data Available

Transcripts for GC12M076540 Gene

fRNAdb Secondary structures for GC12M076540 Gene

  • FR219615

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M076540 Gene

No ASD Table

Relevant External Links for GC12M076540 Gene

GeneLoc Exon Structure for
GC12M076540

No data available for mRNA/cDNA for GC12M076540 Gene

Expression for GC12M076540 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M076540 Gene

Orthologs for GC12M076540 Gene

No data available for Orthologs and Evolution for GC12M076540 Gene

Paralogs for GC12M076540 Gene

No data available for Paralogs for GC12M076540 Gene

Variants for GC12M076540 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M076540 Gene

Disorders for GC12M076540 Gene

No disorders were found for GC12M076540 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M076540 Gene

Publications for GC12M076540 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC12M076540 Gene

Products for GC12M076540 Gene

Sources for GC12M076540 Gene

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