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Aliases for GC12M069139 Gene

Subcategory (RNA class) for GC12M069139 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for GC12M069139 Gene

No Aliases found

ORGUL Members for GC12M069139 Gene

No data available for External Ids for GC12M069139 Gene

Summaries for GC12M069139 Gene

GeneCards Summary for GC12M069139 Gene

GC12M069139 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC12M069139 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC12M069139

Additional gene information for GC12M069139 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC12M069139 Gene

Genomics for GC12M069139 Gene

GeneHancer (GH) Regulatory Elements for GC12M069139 Gene

Promoters and enhancers for GC12M069139 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J069156 Enhancer 1.1 Ensembl ENCODE 0.4 -17.3 -17315 1 SIN3A ZNF2 IRF4 ZNF48 ELK1 ZNF143 RUNX3 DEK RXRA REST GC12M069139 ENSG00000258140
GH12J069154 Enhancer 0.7 ENCODE 0.4 -14.8 -14805 0.2 CTCF USF1 RB1 MAX RAD21 RFX5 YY1 GATA3 ZNF143 SMC3 GC12M069139 ENSG00000258140
GH12J069052 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.2 +86.9 86899 2.1 FOXA2 THRB RARA FOS CREM HMG20B SMARCC1 CEBPB KAT8 TGIF2 CPM RAP1B LYZ GC12M069009 GC12M069139
GH12J069150 Enhancer 0.6 ENCODE 0.4 -11.3 -11291 2.1 SP1 PKNOX1 GLIS1 HNF4G FEZF1 HNF4A ZIC2 YY1 GC12M069139 ENSG00000258140
GH12J069101 Enhancer 0.8 ENCODE 0.3 +38.3 38265 0.2 ELF3 FOXA2 NFIB BMI1 RAD21 RARA YY1 EGR1 SCRT2 THAP11 GC12M069139 GC12M069009
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC12M069139 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M069139 Gene

Genomic Locations for GC12M069139 Gene
chr12:69,139,950-69,139,981
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC12M069139 Gene

Genes around GC12M069139 on UCSC Golden Path with GeneCards custom track

GC12M069139 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M069139 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC12M069139 Gene

ORGUL Member Location for GC12M069139 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M069139 Gene

Proteins for GC12M069139 Gene

Post-translational modifications for GC12M069139 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M069139 Gene

Domains & Families for GC12M069139 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M069139 Gene

Function for GC12M069139 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M069139 Gene

Localization for GC12M069139 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M069139 Gene

Pathways & Interactions for GC12M069139 Gene

SuperPathways for GC12M069139 Gene

No Data Available

Interacting Proteins for GC12M069139 Gene

Gene Ontology (GO) - Biological Process for GC12M069139 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M069139 Gene

Drugs & Compounds for GC12M069139 Gene

No Compound Related Data Available

Transcripts for GC12M069139 Gene

fRNAdb Secondary structures for GC12M069139 Gene

  • FR238252

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M069139 Gene

No ASD Table

Relevant External Links for GC12M069139 Gene

GeneLoc Exon Structure for
GC12M069139

No data available for mRNA/cDNA for GC12M069139 Gene

Expression for GC12M069139 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M069139 Gene

Orthologs for GC12M069139 Gene

No data available for Orthologs and Evolution for GC12M069139 Gene

Paralogs for GC12M069139 Gene

No data available for Paralogs for GC12M069139 Gene

Variants for GC12M069139 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M069139 Gene

Disorders for GC12M069139 Gene

No disorders were found for GC12M069139 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M069139 Gene

Publications for GC12M069139 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC12M069139 Gene

Sources for GC12M069139 Gene

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