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Aliases for GC12M054982 Gene

Subcategory (RNA class) for GC12M054982 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for GC12M054982 Gene

No Aliases found

ORGUL Members for GC12M054982 Gene

No data available for External Ids for GC12M054982 Gene

Summaries for GC12M054982 Gene

GeneCards Summary for GC12M054982 Gene

GC12M054982 is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for GC12M054982 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M054982 Gene

Genomics for GC12M054982 Gene

GeneHancer (GH) Regulatory Elements for GC12M054982 Gene

Promoters and enhancers for GC12M054982 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J055000 Enhancer 0.4 dbSUPER 600.7 -1.3 -1301 1.3 IKZF1 EZH2 DPF2 GC12M054982 TESPA1 ENSG00000257870 GC12P054960
GH12J054976 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.6 18597 9.9 SP1 NKRF ZNF687 MAFK CREM MLLT1 ZNF639 SMARCA4 RELA ZBED1 TESPA1 NEUROD4 DCD GC12M054982 GC12P054960
GH12J054990 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.8 8791 2.3 CREM PRDM1 MLLT1 IKZF1 ZBTB33 POLR2A IKZF2 PKNOX1 DPF2 EED NEUROD4 TESPA1 NCKAP1L GC12M054982 GC12P054960
GH12J054997 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +2.2 2194 3.6 SP1 NANOG POU5F1 NEUROD4 METTL7B TESPA1 GC12M054982 GC12P054960
GH12J054987 Enhancer 1.1 ENCODE dbSUPER 0.4 +11.5 11476 2.3 CC2D1A CBFA2T2 MLLT1 GTF2F1 MCM2 TRIM24 EGR1 SMARCA4 MTA1 GMEB1 CDK2 MMP19 DNAJC14 ENSG00000258086 HOXC5 ENSG00000258344 ENSG00000237493 HOXC8 TMEM198B HNRNPA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M054982 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M054982 Gene

Genomic Locations for GC12M054982 Gene
chr12:54,982,762-55,000,195
(GRCh38/hg38)
Size:
17,434 bases
Orientation:
Minus strand

Genomic View for GC12M054982 Gene

Genes around GC12M054982 on UCSC Golden Path with GeneCards custom track

GC12M054982 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M054982 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M054982 Gene

Proteins for GC12M054982 Gene

Post-translational modifications for GC12M054982 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M054982 Gene

Domains & Families for GC12M054982 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M054982 Gene

Function for GC12M054982 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M054982 Gene

Localization for GC12M054982 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M054982 Gene

Pathways & Interactions for GC12M054982 Gene

PathCards logo

SuperPathways for GC12M054982 Gene

No Data Available

Interacting Proteins for GC12M054982 Gene

Gene Ontology (GO) - Biological Process for GC12M054982 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M054982 Gene

Drugs & Compounds for GC12M054982 Gene

No Compound Related Data Available

Transcripts for GC12M054982 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M054982 Gene

No ASD Table

Relevant External Links for GC12M054982 Gene

GeneLoc Exon Structure for
GC12M054982

No data available for mRNA/cDNA for GC12M054982 Gene

Expression for GC12M054982 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M054982 Gene

Orthologs for GC12M054982 Gene

No data available for Orthologs and Evolution for GC12M054982 Gene

Paralogs for GC12M054982 Gene

No data available for Paralogs for GC12M054982 Gene

Variants for GC12M054982 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M054982 Gene

Disorders for GC12M054982 Gene

No disorders were found for GC12M054982 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M054982 Gene

Publications for GC12M054982 Gene

No publications were found for GC12M054982 Gene.

No data available for External Links for GC12M054982 Gene

Products for GC12M054982 Gene

Sources for GC12M054982 Gene

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