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Aliases for GC12M053768 Gene

Subcategory (RNA class) for GC12M053768 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC12M053768 Gene

No Aliases found

ORGUL Members for GC12M053768 Gene

No data available for External Ids for GC12M053768 Gene

Summaries for GC12M053768 Gene

GeneCards Summary for GC12M053768 Gene

GC12M053768 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC12M053768 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M053768 Gene

Genomics for GC12M053768 Gene

GeneHancer (GH) Regulatory Elements for GC12M053768 Gene

Promoters and enhancers for GC12M053768 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J053767 Enhancer 0.9 ENCODE 600.7 +1.5 1530 0.1 CTCF ZSCAN21 SP7 PRDM1 RAD21 CREB1 PKNOX1 ZBTB8A PRDM10 TARDBP GC12M053768 CISTR ENSG00000286069
GH12J053768 Enhancer 0.6 ENCODE 600.7 -1.1 -1064 3.3 POLR2A JUN SP1 JUND FOS EP300 PRDM4 FOSL2 ZBTB12 GC12M053768 HOXC-AS3 HOXC10 MIR196A2 HOXC6 HOXC5 HOXC9 HOXC-AS1 HOXC-AS2 HOXC8
GH12J053756 Promoter/Enhancer 1.3 Ensembl ENCODE 0.4 +12.2 12243 1.3 CTCF ELF3 ZNF121 ELF1 RAD21 IKZF1 PKNOX1 RFX1 ZNF600 PRDM10 CISTR PCBP2 SP1 ENSG00000258344 CALCOCO1 AAAS HNRNPA1 ATF7 MIR196A2 LOC100652999
GH12J053798 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -31.3 -31309 13.4 ELF3 CEBPG PRDM1 ZNF644 KAT8 IKZF1 FOSL2 CREB1 RFX1 ZBTB33 HOXC13 HOXC13-AS HOXC6 HOXC-AS2 HOXC-AS1 HOXC9 HOXC8 RN7SKP289 GC12M053768 ENSG00000286069
GH12J053811 Enhancer 0.8 Ensembl dbSUPER 0.3 -41.3 -41309 2.6 PRDM1 ZNF512 ZNF776 PKNOX1 TCF12 ZBTB2 ZNF366 L3MBTL2 TARBP2 HOXC13 HOXC13-AS ZNF740 HOXC6 HOXC9 HOXC-AS1 HOXC-AS2 HOXC8 SCAT2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M053768 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M053768 Gene

Genomic Locations for GC12M053768 Gene
chr12:53,768,590-53,769,392
(GRCh38/hg38)
Size:
803 bases
Orientation:
Minus strand

Genomic View for GC12M053768 Gene

Genes around GC12M053768 on UCSC Golden Path with GeneCards custom track

GC12M053768 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M053768 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M053768 Gene

Proteins for GC12M053768 Gene

Post-translational modifications for GC12M053768 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M053768 Gene

Domains & Families for GC12M053768 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M053768 Gene

Function for GC12M053768 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M053768 Gene

Localization for GC12M053768 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M053768 Gene

Pathways & Interactions for GC12M053768 Gene

PathCards logo

SuperPathways for GC12M053768 Gene

No Data Available

Interacting Proteins for GC12M053768 Gene

Gene Ontology (GO) - Biological Process for GC12M053768 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M053768 Gene

Drugs & Compounds for GC12M053768 Gene

No Compound Related Data Available

Transcripts for GC12M053768 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M053768 Gene

No ASD Table

Relevant External Links for GC12M053768 Gene

GeneLoc Exon Structure for
GC12M053768

No data available for mRNA/cDNA for GC12M053768 Gene

Expression for GC12M053768 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M053768 Gene

Orthologs for GC12M053768 Gene

No data available for Orthologs and Evolution for GC12M053768 Gene

Paralogs for GC12M053768 Gene

No data available for Paralogs for GC12M053768 Gene

Variants for GC12M053768 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M053768 Gene

Disorders for GC12M053768 Gene

No disorders were found for GC12M053768 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M053768 Gene

Publications for GC12M053768 Gene

No publications were found for GC12M053768 Gene.

No data available for External Links for GC12M053768 Gene

Products for GC12M053768 Gene

Sources for GC12M053768 Gene

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