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Aliases for GC12M046187 Gene

Subcategory (RNA class) for GC12M046187 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC12M046187 Gene

No Aliases found

ORGUL Members for GC12M046187 Gene

No data available for External Ids for GC12M046187 Gene

Summaries for GC12M046187 Gene

GeneCards Summary for GC12M046187 Gene

GC12M046187 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC12M046187 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M046187 Gene

Genomics for GC12M046187 Gene

GeneHancer (GH) Regulatory Elements for GC12M046187 Gene

Promoters and enhancers for GC12M046187 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J046187 Enhancer 1 Ensembl ENCODE dbSUPER 600.7 +0.6 640 0.8 POLR2A SP1 CEBPG CEBPB ATF3 YY1 HNF4A EBF1 PAF1 RXRA GC12M046187 SLC38A1 GC12P046111
GH12J046184 Enhancer 0.8 Ensembl dbSUPER 0.7 +2.5 2539 2.2 SP1 MLLT1 POLR2A FOXA2 JUND ATF3 YY1 HNF4A SSRP1 RXRA SLC38A1 GC12M046187 GC12P046111
GH12J046206 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 -26.9 -26898 17.4 SP1 ZNF148 NKRF MLLT1 ZNF687 NCOA3 BACH1 TRIM24 POLR2A RELA SLC38A1 ENSG00000273015 SLC38A2 ARID2 ENSG00000257261 SCAF11 ENSG00000274591 GC12M046187
GH12J046177 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.4 +10.0 9953 1.3 ZNF687 RELA PRDM1 IKZF1 IKZF2 LARP7 DPF2 RUNX3 HDGF NR2F1 SLC38A1 GC12M046187 GC12P046111
GH12J046179 Enhancer 1 ENCODE dbSUPER 0.4 +8.1 8060 1.6 ZNF687 NCOA3 MLLT1 IKZF1 CREB1 BACH1 IKZF2 TRIM22 CTBP1 ZSCAN29 SLC38A1 GC12M046187 GC12P046111
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M046187 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M046187 Gene

Genomic Locations for GC12M046187 Gene
chr12:46,187,791-46,188,040
(GRCh38/hg38)
Size:
250 bases
Orientation:
Minus strand

Genomic View for GC12M046187 Gene

Genes around GC12M046187 on UCSC Golden Path with GeneCards custom track

GC12M046187 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M046187 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M046187 Gene

Proteins for GC12M046187 Gene

Post-translational modifications for GC12M046187 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M046187 Gene

Domains & Families for GC12M046187 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M046187 Gene

Function for GC12M046187 Gene

Phenotypes From GWAS Catalog for GC12M046187 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M046187 Gene

Localization for GC12M046187 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M046187 Gene

Pathways & Interactions for GC12M046187 Gene

PathCards logo

SuperPathways for GC12M046187 Gene

No Data Available

Interacting Proteins for GC12M046187 Gene

Gene Ontology (GO) - Biological Process for GC12M046187 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M046187 Gene

Drugs & Compounds for GC12M046187 Gene

No Compound Related Data Available

Transcripts for GC12M046187 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M046187 Gene

No ASD Table

Relevant External Links for GC12M046187 Gene

GeneLoc Exon Structure for
GC12M046187

No data available for mRNA/cDNA for GC12M046187 Gene

Expression for GC12M046187 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M046187 Gene

Orthologs for GC12M046187 Gene

No data available for Orthologs and Evolution for GC12M046187 Gene

Paralogs for GC12M046187 Gene

No data available for Paralogs for GC12M046187 Gene

Variants for GC12M046187 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M046187 Gene

Disorders for GC12M046187 Gene

No disorders were found for GC12M046187 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M046187 Gene

Publications for GC12M046187 Gene

No publications were found for GC12M046187 Gene.

No data available for External Links for GC12M046187 Gene

Products for GC12M046187 Gene

Sources for GC12M046187 Gene

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