Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC12M012877 Gene

Subcategory (RNA class) for GC12M012877 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC12M012877 Gene

No Aliases found

ORGUL Members for GC12M012877 Gene

No data available for External Ids for GC12M012877 Gene

Summaries for GC12M012877 Gene

GeneCards Summary for GC12M012877 Gene

GC12M012877 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC12M012877 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC12M012877 Gene

Genomics for GC12M012877 Gene

GeneHancer (GH) Regulatory Elements for GC12M012877 Gene

Promoters and enhancers for GC12M012877 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J011773 Enhancer 1 FANTOM5 ENCODE dbSUPER 600.7 +0.3 277 2.6 LARP7 EED RUNX3 EBF1 POLR2A MYC MAX GC12M012877 ETV6 BCL2L14 PIR53480
GH12J011761 Enhancer 1.8 UCNEbase FANTOM5 ENCODE dbSUPER 0.4 +7.8 7805 11.4 SP1 NKRF ZNF687 RELA CREM MLLT1 RAD21 ZBED1 IKZF1 RXRA ETV6 BCL2L14 GC12M012877 PIR53480
GH12J011743 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +22.9 22914 18.1 SP1 ZNF687 RELA ZNF548 CREM MLLT1 ZBED1 IKZF1 POLR2A BACH1 ETV6 BCL2L14 TAS2R43 TAS2R20 TAS2R50 ENSG00000256682 ENSG00000256981 TAS2R14 DDX55P1 LINC01252
GH12J011777 Enhancer 1 ENCODE dbSUPER 0.7 -4.4 -4368 3.6 SP1 ZNF687 RELA CREM MLLT1 ZBED1 IKZF1 ZBTB33 IKZF2 REST ETV6 GC12M012877 PIR45971
GH12J011792 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.3 -21.4 -21442 7.6 CBFA2T2 ZNF148 MLLT1 BACH1 TRIM24 ZNF639 SMARCA4 IKZF1 POLR2A DPF2 ETV6 BCL2L14 GC12M012877 PIR45971
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC12M012877 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC12M012877 Gene

Genomic Locations for GC12M012877 Gene
chr12:11,721,008-11,775,009
(GRCh38/hg38)
Size:
54,002 bases
Orientation:
Minus strand

Genomic View for GC12M012877 Gene

Genes around GC12M012877 on UCSC Golden Path with GeneCards custom track

GC12M012877 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC12M012877 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC12M012877 Gene

Proteins for GC12M012877 Gene

Post-translational modifications for GC12M012877 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC12M012877 Gene

Domains & Families for GC12M012877 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC12M012877 Gene

Function for GC12M012877 Gene

Phenotypes From GWAS Catalog for GC12M012877 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC12M012877 Gene

Localization for GC12M012877 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC12M012877 Gene

Pathways & Interactions for GC12M012877 Gene

PathCards logo

SuperPathways for GC12M012877 Gene

No Data Available

Interacting Proteins for GC12M012877 Gene

Gene Ontology (GO) - Biological Process for GC12M012877 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC12M012877 Gene

Drugs & Compounds for GC12M012877 Gene

No Compound Related Data Available

Transcripts for GC12M012877 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC12M012877 Gene

No ASD Table

Relevant External Links for GC12M012877 Gene

GeneLoc Exon Structure for
GC12M012877

No data available for mRNA/cDNA for GC12M012877 Gene

Expression for GC12M012877 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC12M012877 Gene

Orthologs for GC12M012877 Gene

No data available for Orthologs and Evolution for GC12M012877 Gene

Paralogs for GC12M012877 Gene

No data available for Paralogs for GC12M012877 Gene

Variants for GC12M012877 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC12M012877 Gene

Disorders for GC12M012877 Gene

No disorders were found for GC12M012877 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC12M012877 Gene

Publications for GC12M012877 Gene

No publications were found for GC12M012877 Gene.

No data available for External Links for GC12M012877 Gene

Products for GC12M012877 Gene

Sources for GC12M012877 Gene

Content
Loading form....