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Aliases for GC11P117264 Gene

Subcategory (RNA class) for GC11P117264 Gene


Quality Score for this RNA gene is


Aliases for GC11P117264 Gene

No Aliases found

ORGUL Members for GC11P117264 Gene

No data available for External Ids for GC11P117264 Gene

Summaries for GC11P117264 Gene

GeneCards Summary for GC11P117264 Gene

GC11P117264 is an RNA Gene, and is affiliated with the scaRNA class.

fRNAdb sequence ontologies for GC11P117264 Gene - the ORGUL cluster for this gene includes several descriptions:

  • snoRNA: A snoRNA (small nucleolar RNA) is any one of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC11P117264

Additional gene information for GC11P117264 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P117264 Gene

Genomics for GC11P117264 Gene

GeneHancer (GH) Regulatory Elements for GC11P117264 Gene

Promoters and enhancers for GC11P117264 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J117259 Enhancer 0.5 Ensembl ENCODE 0.7 -4.1 -4097 1.4 JUND GC11P117264 RNF214
GH11J117238 Enhancer 0.7 Ensembl ENCODE 0.3 -24.4 -24418 1.6 CTCF POLR2A FOS JUND BACE1 ENSG00000252992 ENSG00000254851 RNF214 GC11P117264
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11P117264 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P117264 Gene

Genomic Locations for GC11P117264 Gene
155 bases
Plus strand

Genomic View for GC11P117264 Gene

Genes around GC11P117264 on UCSC Golden Path with GeneCards custom track

GC11P117264 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P117264 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P117264 Gene

ORGUL Member Location for GC11P117264 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P117264 Gene

Proteins for GC11P117264 Gene

Post-translational modifications for GC11P117264 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P117264 Gene

Domains & Families for GC11P117264 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P117264 Gene

Function for GC11P117264 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P117264 Gene

Localization for GC11P117264 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P117264 Gene

Pathways & Interactions for GC11P117264 Gene

PathCards logo

SuperPathways for GC11P117264 Gene

No Data Available

Interacting Proteins for GC11P117264 Gene

Gene Ontology (GO) - Biological Process for GC11P117264 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11P117264 Gene

Drugs & Compounds for GC11P117264 Gene

No Compound Related Data Available

Transcripts for GC11P117264 Gene

fRNAdb Secondary structures for GC11P117264 Gene

  • FR037671
  • FR182973

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P117264 Gene

No ASD Table

Relevant External Links for GC11P117264 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11P117264 Gene

Expression for GC11P117264 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P117264 Gene

Orthologs for GC11P117264 Gene

No data available for Orthologs and Evolution for GC11P117264 Gene

Paralogs for GC11P117264 Gene

No data available for Paralogs for GC11P117264 Gene

Variants for GC11P117264 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P117264 Gene

Disorders for GC11P117264 Gene

No disorders were found for GC11P117264 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P117264 Gene

Publications for GC11P117264 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1
  4. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 1
  5. Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs. (PMID: 12032087) Darzacq X … Kiss T (The EMBO journal 2002) 1

No data available for External Links for GC11P117264 Gene

Products for GC11P117264 Gene

Sources for GC11P117264 Gene

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