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Aliases for GC11P115428 Gene

Subcategory (RNA class) for GC11P115428 Gene


Quality Score for this RNA gene is


Aliases for GC11P115428 Gene

No Aliases found

ORGUL Members for GC11P115428 Gene

No data available for External Ids for GC11P115428 Gene

Summaries for GC11P115428 Gene

GeneCards Summary for GC11P115428 Gene

GC11P115428 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC11P115428 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC11P115428

Additional gene information for GC11P115428 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P115428 Gene

Genomics for GC11P115428 Gene

GeneHancer (GH) Regulatory Elements for GC11P115428 Gene

Promoters and enhancers for GC11P115428 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J115500 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 0.2 +75.0 74963 5.4 HDGF SP1 ELF3 MNT POLR2A ZNF121 CEBPG ZNF384 SP5 KLF14 CADM1 NXPE4 GC11P115428
GH11J115421 Enhancer 1 Ensembl ENCODE 0.4 -6.5 -6538 2.4 SP7 PRDM1 ZNF680 ZBTB8A ZIC2 ZEB2 ZNF629 TCF7L2 ZNF792 SCRT2 ENSG00000256315 GC11P115428 GC11P115411 CADM1
GH11J115452 Enhancer 0.8 Ensembl 0.3 +24.2 24163 0.2 ZSCAN21 SP7 ZNF488 ZBTB8A ZEB2 ZNF639 ZNF629 PATZ1 TCF7L2 ZNF501 GC11P115428 CADM1
GH11J115488 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 +60.9 60899 2.2 CEBPG CREB1 CEBPA ZNF639 ZNF629 REST CTBP1 TCF7L2 CEBPB SP1 NXPE4 CADM1 GC11P115428
GH11J115471 Enhancer 0.9 Ensembl ENCODE 0.3 +43.2 43163 0.6 MAFK SP1 RXRA GATAD2A FOXA2 JUND YY1 ZBTB33 SAP130 GATA3 CADM1 GC11P115428
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11P115428 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P115428 Gene

Genomic Locations for GC11P115428 Gene
154 bases
Plus strand

Genomic View for GC11P115428 Gene

Genes around GC11P115428 on UCSC Golden Path with GeneCards custom track

GC11P115428 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P115428 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P115428 Gene

ORGUL Member Location for GC11P115428 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P115428 Gene

Proteins for GC11P115428 Gene

Post-translational modifications for GC11P115428 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P115428 Gene

Domains & Families for GC11P115428 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P115428 Gene

Function for GC11P115428 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P115428 Gene

Localization for GC11P115428 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P115428 Gene

Pathways & Interactions for GC11P115428 Gene

PathCards logo

SuperPathways for GC11P115428 Gene

No Data Available

Interacting Proteins for GC11P115428 Gene

Gene Ontology (GO) - Biological Process for GC11P115428 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11P115428 Gene

Drugs & Compounds for GC11P115428 Gene

No Compound Related Data Available

Transcripts for GC11P115428 Gene

fRNAdb Secondary structures for GC11P115428 Gene

  • FR262071
  • FR206763

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P115428 Gene

No ASD Table

Relevant External Links for GC11P115428 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11P115428 Gene

Expression for GC11P115428 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P115428 Gene

Orthologs for GC11P115428 Gene

No data available for Orthologs and Evolution for GC11P115428 Gene

Paralogs for GC11P115428 Gene

No data available for Paralogs for GC11P115428 Gene

Variants for GC11P115428 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P115428 Gene

Disorders for GC11P115428 Gene

No disorders were found for GC11P115428 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P115428 Gene

Publications for GC11P115428 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC11P115428 Gene

Products for GC11P115428 Gene

Sources for GC11P115428 Gene

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