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Aliases for GC11P114163 Gene

Subcategory (RNA class) for GC11P114163 Gene


Quality Score for this RNA gene is


Aliases for GC11P114163 Gene

No Aliases found

ORGUL Members for GC11P114163 Gene

No data available for External Ids for GC11P114163 Gene

Summaries for GC11P114163 Gene

GeneCards Summary for GC11P114163 Gene

GC11P114163 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC11P114163 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC11P114163

Additional gene information for GC11P114163 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P114163 Gene

Genomics for GC11P114163 Gene

GeneHancer (GH) Regulatory Elements for GC11P114163 Gene

Promoters and enhancers for GC11P114163 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J114152 Promoter/Enhancer 2.5 UCNEbase FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.2 -225 22.1 ELF3 CBFA2T2 ZNF148 MLLT1 CEBPG ZNF384 NFIB ZSCAN21 TRIM24 SP7 GC11P114163 ENSG00000270179 ZBTB16 NNMT TTC12 ZW10 CLDN25 LOC101928875 GC11M114060
GH11J114143 Enhancer 1.2 UCNEbase ENCODE dbSUPER 0.3 -21.3 -21342 0.4 ZSCAN21 SP7 PKNOX1 ZNF488 TCF7L2 SCRT2 OSR2 WT1 ZNF366 EZH2 GC11P114163 ZBTB16 GC11M114060
GH11J114146 Enhancer 1 ENCODE dbSUPER 0.4 -14.4 -14413 5 CBFA2T2 SMARCA4 RXRA IKZF1 ZNF512 HDAC1 ETV6 SOX6 TCF12 CTBP1 NNMT GC11P114163 GC11M114060 ZBTB16
GH11J114057 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 -100.6 -100562 11.2 YY1 SP1 KLF14 ZNF704 GLIS2 RXRA ZBTB8A PRDM10 ZIC2 POLR2A ZBTB16 GC11M114060 NNMT GC11P114163
GH11J114142 Enhancer 0.9 ENCODE dbSUPER 0.4 -19.9 -19922 2.1 ZNF121 SP7 SP1 PKNOX1 ZIC2 ZSCAN4 TCF7L2 ZBTB44 EGR1 OSR2 NNMT GC11P114163 ZBTB16 GC11M114060
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11P114163 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P114163 Gene

Genomic Locations for GC11P114163 Gene
154 bases
Plus strand

Genomic View for GC11P114163 Gene

Genes around GC11P114163 on UCSC Golden Path with GeneCards custom track

GC11P114163 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P114163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P114163 Gene

ORGUL Member Location for GC11P114163 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P114163 Gene

Proteins for GC11P114163 Gene

Post-translational modifications for GC11P114163 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P114163 Gene

Domains & Families for GC11P114163 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P114163 Gene

Function for GC11P114163 Gene

Phenotypes From GWAS Catalog for GC11P114163 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P114163 Gene

Localization for GC11P114163 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P114163 Gene

Pathways & Interactions for GC11P114163 Gene

PathCards logo

SuperPathways for GC11P114163 Gene

No Data Available

Interacting Proteins for GC11P114163 Gene

Gene Ontology (GO) - Biological Process for GC11P114163 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11P114163 Gene

Drugs & Compounds for GC11P114163 Gene

No Compound Related Data Available

Transcripts for GC11P114163 Gene

fRNAdb Secondary structures for GC11P114163 Gene

  • FR390989
  • FR307444

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P114163 Gene

No ASD Table

Relevant External Links for GC11P114163 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11P114163 Gene

Expression for GC11P114163 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P114163 Gene

Orthologs for GC11P114163 Gene

No data available for Orthologs and Evolution for GC11P114163 Gene

Paralogs for GC11P114163 Gene

No data available for Paralogs for GC11P114163 Gene

Variants for GC11P114163 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P114163 Gene

Disorders for GC11P114163 Gene

No disorders were found for GC11P114163 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P114163 Gene

Publications for GC11P114163 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC11P114163 Gene

Products for GC11P114163 Gene

Sources for GC11P114163 Gene

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