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Aliases for GC11P111544 Gene

Subcategory (RNA class) for GC11P111544 Gene


Quality Score for this RNA gene is


Aliases for GC11P111544 Gene

No Aliases found

ORGUL Members for GC11P111544 Gene

No data available for External Ids for GC11P111544 Gene

Summaries for GC11P111544 Gene

GeneCards Summary for GC11P111544 Gene

GC11P111544 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC11P111544 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

View fRNAdb secondary structures for GC11P111544

Additional gene information for GC11P111544 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P111544 Gene

Genomics for GC11P111544 Gene

GeneHancer (GH) Regulatory Elements for GC11P111544 Gene

Promoters and enhancers for GC11P111544 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J111514 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 600.7 +1.9 1852 0.8 ELF3 ZNF148 RFX1 PRDM10 PKNOX1 CTCF BMI1 POLR2A SIN3A C11orf88 BTG4 GC11P111544 GC11P111545 GC11P111568 MIR34B PIR62701 MIR34C ENSG00000254980
GH11J111512 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 600.7 +0.1 113 1.7 ZNF148 GLIS2 CTCF EZH2 POLR2A ZBTB26 ZNF335 BTG4 C11orf88 GC11P111544 GC11P111545 GC11P111568 MIR34B MIR34C PIR62701 PPP2R1B LAYN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11P111544 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P111544 Gene

Genomic Locations for GC11P111544 Gene
58 bases
Plus strand

Genomic View for GC11P111544 Gene

Genes around GC11P111544 on UCSC Golden Path with GeneCards custom track

GC11P111544 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P111544 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P111544 Gene

ORGUL Member Location for GC11P111544 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P111544 Gene

Proteins for GC11P111544 Gene

Post-translational modifications for GC11P111544 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P111544 Gene

Domains & Families for GC11P111544 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P111544 Gene

Function for GC11P111544 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P111544 Gene

Localization for GC11P111544 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P111544 Gene

Pathways & Interactions for GC11P111544 Gene

PathCards logo

SuperPathways for GC11P111544 Gene

No Data Available

Interacting Proteins for GC11P111544 Gene

Gene Ontology (GO) - Biological Process for GC11P111544 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11P111544 Gene

Drugs & Compounds for GC11P111544 Gene

No Compound Related Data Available

Transcripts for GC11P111544 Gene

fRNAdb Secondary structures for GC11P111544 Gene

  • FR002316
  • FR175234

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P111544 Gene

No ASD Table

Relevant External Links for GC11P111544 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11P111544 Gene

Expression for GC11P111544 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P111544 Gene

Orthologs for GC11P111544 Gene

No data available for Orthologs and Evolution for GC11P111544 Gene

Paralogs for GC11P111544 Gene

No data available for Paralogs for GC11P111544 Gene

Variants for GC11P111544 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P111544 Gene

Disorders for GC11P111544 Gene

No disorders were found for GC11P111544 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P111544 Gene

Publications for GC11P111544 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC11P111544 Gene

Products for GC11P111544 Gene

Sources for GC11P111544 Gene

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