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Aliases for GC11P108085 Gene

Subcategory (RNA class) for GC11P108085 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC11P108085 Gene

No Aliases found

ORGUL Members for GC11P108085 Gene

No data available for External Ids for GC11P108085 Gene

Summaries for GC11P108085 Gene

GeneCards Summary for GC11P108085 Gene

GC11P108085 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC11P108085 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC11P108085 Gene

Genomics for GC11P108085 Gene

GeneHancer (GH) Regulatory Elements for GC11P108085 Gene

Promoters and enhancers for GC11P108085 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J108008 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.2 -75.0 -75014 3.4 SP1 CC2D1A CTCF ELF3 ZFX MNT CBFA2T2 NKRF POLR2A MLLT1 CUL5 NPAT CWF19L2 ALKBH8 DDX10 POGLUT3 ACAT1 GC11P108085
GH11J108069 Enhancer 0.7 Ensembl ENCODE 0.4 -15.1 -15111 2 FOXA2 ATF3 IRF2 ATF7 ACAT1 ENSG00000255467 GC11P108085 CUL5
GH11J108020 Enhancer 1 Ensembl ENCODE 0.2 -65.6 -65611 3.4 CC2D1A ZNF148 GTF2F1 ZNF644 MZF1 SMARCA4 DPF2 IKZF1 RFX1 ZNF600 ACAT1 CUL5 GC11P108085
GH11J108029 Enhancer 0.5 Ensembl 0.2 -55.8 -55811 0.2 SMARCA4 SOX6 EHMT2 FOXK2 TAL1 SMARCE1 CBFA2T3 CUL5 GC11P108085
GH11J108025 Enhancer 0.5 Ensembl 0.2 -59.9 -59911 2.8 ZNF687 RELA MLLT1 IKZF1 ZNF143 NBN ACAT1 ENSG00000255467 CUL5 GC11P108085
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11P108085 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P108085 Gene

Genomic Locations for GC11P108085 Gene
chr11:108,084,912-108,085,012
(GRCh38/hg38)
Size:
101 bases
Orientation:
Plus strand

Genomic View for GC11P108085 Gene

Genes around GC11P108085 on UCSC Golden Path with GeneCards custom track

GC11P108085 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P108085 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P108085 Gene

Proteins for GC11P108085 Gene

Post-translational modifications for GC11P108085 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P108085 Gene

Domains & Families for GC11P108085 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P108085 Gene

Function for GC11P108085 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P108085 Gene

Localization for GC11P108085 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P108085 Gene

Pathways & Interactions for GC11P108085 Gene

PathCards logo

SuperPathways for GC11P108085 Gene

No Data Available

Interacting Proteins for GC11P108085 Gene

Gene Ontology (GO) - Biological Process for GC11P108085 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11P108085 Gene

Drugs & Compounds for GC11P108085 Gene

No Compound Related Data Available

Transcripts for GC11P108085 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P108085 Gene

No ASD Table

Relevant External Links for GC11P108085 Gene

GeneLoc Exon Structure for
GC11P108085

No data available for mRNA/cDNA for GC11P108085 Gene

Expression for GC11P108085 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P108085 Gene

Orthologs for GC11P108085 Gene

No data available for Orthologs and Evolution for GC11P108085 Gene

Paralogs for GC11P108085 Gene

No data available for Paralogs for GC11P108085 Gene

Variants for GC11P108085 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P108085 Gene

Disorders for GC11P108085 Gene

No disorders were found for GC11P108085 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P108085 Gene

Publications for GC11P108085 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

No data available for External Links for GC11P108085 Gene

Products for GC11P108085 Gene

Sources for GC11P108085 Gene

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