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Aliases for GC11P031876 Gene

Subcategory (RNA class) for GC11P031876 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC11P031876 Gene

No Aliases found

ORGUL Members for GC11P031876 Gene

No data available for External Ids for GC11P031876 Gene

Summaries for GC11P031876 Gene

GeneCards Summary for GC11P031876 Gene

GC11P031876 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC11P031876 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC11P031876

Additional gene information for GC11P031876 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P031876 Gene

Genomics for GC11P031876 Gene

GeneHancer (GH) Regulatory Elements for GC11P031876 Gene

Promoters and enhancers for GC11P031876 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I031874 Enhancer 1.4 VISTA ENCODE dbSUPER 550.8 -0.3 -299 3.5 INSM2 FEZF1 ZEB1 ZNF366 ZNF391 FOS ZNF398 ZEB2 TSHZ1 ZNF843 GC11P031876 GC11M031843 PAX6-AS1 RCN1
GH11I031871 Enhancer 0.9 ENCODE dbSUPER 0.8 -4.9 -4871 0.2 CTCF PKNOX1 RB1 ZFP64 SIN3A ZNF2 RAD21 ZFHX2 ARID2 ZNF143 GC11P031876 GC11M031843 RCN1 PAX6-AS1
GH11I031883 Enhancer 0.6 ENCODE 0.4 +7.1 7089 0.2 MAZ ZNF398 FEZF1 ZIC2 ATF2 GLIS2 ZBTB48 GLIS1 ZNF629 ZNF600 GC11P031876 PAX6-AS1 RCN1 GC11M032004 PIR59943
GH11I031967 Enhancer 0.8 VISTA UCNEbase 0.2 +92.0 91971 0.8 LOC100506675 GC11M032004 PIR59943 GC11P031876 PAX6-AS1 RCN1
GH11I031863 Enhancer 0.3 ENCODE 0.4 -12.4 -12445 1.1 POU5F1 PAX6 PAX6-AS1 RCN1 GC11P031876 GC11M031843 GC11P031843
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC11P031876 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P031876 Gene

Genomic Locations for GC11P031876 Gene
chr11:31,876,081-31,876,247
(GRCh38/hg38)
Size:
167 bases
Orientation:
Plus strand

Genomic View for GC11P031876 Gene

Genes around GC11P031876 on UCSC Golden Path with GeneCards custom track

GC11P031876 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P031876 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P031876 Gene

ORGUL Member Location for GC11P031876 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P031876 Gene

Proteins for GC11P031876 Gene

Post-translational modifications for GC11P031876 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P031876 Gene

Domains & Families for GC11P031876 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P031876 Gene

Function for GC11P031876 Gene

Phenotypes From GWAS Catalog for GC11P031876 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P031876 Gene

Localization for GC11P031876 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P031876 Gene

Pathways & Interactions for GC11P031876 Gene

SuperPathways for GC11P031876 Gene

No Data Available

Interacting Proteins for GC11P031876 Gene

Gene Ontology (GO) - Biological Process for GC11P031876 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11P031876 Gene

Drugs & Compounds for GC11P031876 Gene

No Compound Related Data Available

Transcripts for GC11P031876 Gene

fRNAdb Secondary structures for GC11P031876 Gene

  • FR034265
  • FR175539

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P031876 Gene

No ASD Table

Relevant External Links for GC11P031876 Gene

GeneLoc Exon Structure for
GC11P031876

No data available for mRNA/cDNA for GC11P031876 Gene

Expression for GC11P031876 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P031876 Gene

Orthologs for GC11P031876 Gene

No data available for Orthologs and Evolution for GC11P031876 Gene

Paralogs for GC11P031876 Gene

No data available for Paralogs for GC11P031876 Gene

Variants for GC11P031876 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P031876 Gene

Disorders for GC11P031876 Gene

No disorders were found for GC11P031876 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P031876 Gene

Publications for GC11P031876 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC11P031876 Gene

Sources for GC11P031876 Gene

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