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Aliases for GC11P008582 Gene

Subcategory (RNA class) for GC11P008582 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for GC11P008582 Gene

No Aliases found

No data available for External Ids for GC11P008582 Gene

Summaries for GC11P008582 Gene

GeneCards Summary for GC11P008582 Gene

GC11P008582 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC11P008582 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for GC11P008582 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11P008582 Gene

Genomics for GC11P008582 Gene

GeneHancer (GH) Regulatory Elements for GC11P008582 Gene

Promoters and enhancers for GC11P008582 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J008583 Enhancer 0.8 Ensembl ENCODE 600.7 +2.0 1953 1.2 MAFK PPARG PRDM10 RXRB SOX13 FOXA2 JUNB NFIA NR2F6 FOXA3 GC11P008582 GC11P008585 STK33 SNORA3A RPL27A TMEM9B-AS1
GH11J008567 Enhancer 0.7 Ensembl 0.4 -14.5 -14536 0.6 SP1 SP7 CREM IKZF1 BACH1 IKZF2 ZNF629 DPF2 JUND RUNX3 STK33 ENSG00000252778 GC11P008582
GH11J008566 Enhancer 0.7 Ensembl ENCODE 0.4 -15.6 -15636 0.4 CTCF RAD21 PKNOX1 REST TRIM22 SMC3 ZNF654 ENSG00000252778 GC11P008582 STK33
GH11J008562 Enhancer 0.2 Ensembl 0.3 -20.0 -20036 0.8 STK33 ENSG00000252778 GC11P008582
GH11J008561 Enhancer 0.2 Ensembl 0.3 -21.2 -21236 0.4 STK33 ENSG00000252778 GC11P008582
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11P008582 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11P008582 Gene

Genomic Locations for GC11P008582 Gene
chr11:8,582,437-8,582,470
(GRCh38/hg38)
Size:
34 bases
Orientation:
Plus strand

Genomic View for GC11P008582 Gene

Genes around GC11P008582 on UCSC Golden Path with GeneCards custom track

GC11P008582 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11P008582 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11P008582 Gene

ORGUL Member Location for GC11P008582 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11P008582 Gene

Proteins for GC11P008582 Gene

Post-translational modifications for GC11P008582 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11P008582 Gene

Domains & Families for GC11P008582 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11P008582 Gene

Function for GC11P008582 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11P008582 Gene

Localization for GC11P008582 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11P008582 Gene

Pathways & Interactions for GC11P008582 Gene

PathCards logo

SuperPathways for GC11P008582 Gene

No Data Available

Interacting Proteins for GC11P008582 Gene

Gene Ontology (GO) - Biological Process for GC11P008582 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11P008582 Gene

Drugs & Compounds for GC11P008582 Gene

No Compound Related Data Available

Transcripts for GC11P008582 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC11P008582 Gene

No ASD Table

Relevant External Links for GC11P008582 Gene

GeneLoc Exon Structure for
GC11P008582

No data available for mRNA/cDNA for GC11P008582 Gene

Expression for GC11P008582 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11P008582 Gene

Orthologs for GC11P008582 Gene

No data available for Orthologs and Evolution for GC11P008582 Gene

Paralogs for GC11P008582 Gene

No data available for Paralogs for GC11P008582 Gene

Variants for GC11P008582 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11P008582 Gene

Disorders for GC11P008582 Gene

No disorders were found for GC11P008582 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11P008582 Gene

Publications for GC11P008582 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC11P008582 Gene

Products for GC11P008582 Gene

Sources for GC11P008582 Gene

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