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Aliases for GC11M130915 Gene

Subcategory (RNA class) for GC11M130915 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for GC11M130915 Gene

No Aliases found

ORGUL Members for GC11M130915 Gene

No data available for External Ids for GC11M130915 Gene

Summaries for GC11M130915 Gene

GeneCards Summary for GC11M130915 Gene

GC11M130915 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC11M130915 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC11M130915

Additional gene information for GC11M130915 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M130915 Gene

Genomics for GC11M130915 Gene

GeneHancer (GH) Regulatory Elements for GC11M130915 Gene

Promoters and enhancers for GC11M130915 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J130915 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 -1.0 -957 2.6 ZFX NKRF POLR2A ZNF687 CTCF YY1 SP7 ELF1 KLF14 CREM SNX19 GC11M130915 ZBTB44 PRDM10
GH11J130911 Enhancer 0.4 Ensembl dbSUPER 600.7 +1.1 1142 0.4 GC11M130915 SNX19 GC11M130907 PIR41408
GH11J130908 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +6.0 6042 2.3 FOS JUND JUN SNX19 ADAMTS8 LOC103611081 LINC02551 GC11M130907 PIR41408 GC11M130915
GH11J130907 Enhancer 0.3 dbSUPER 0.4 +8.0 7984 0.5 MNT GC11M130907 PIR41408 SNX19 ADAMTS8 LOC103611081 LINC02551 GC11P130904 GC11M130915
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11M130915 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M130915 Gene

Genomic Locations for GC11M130915 Gene
chr11:130,915,312-130,915,343
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC11M130915 Gene

Genes around GC11M130915 on UCSC Golden Path with GeneCards custom track

GC11M130915 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M130915 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11M130915 Gene

ORGUL Member Location for GC11M130915 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M130915 Gene

Proteins for GC11M130915 Gene

Post-translational modifications for GC11M130915 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M130915 Gene

Domains & Families for GC11M130915 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M130915 Gene

Function for GC11M130915 Gene

Phenotypes From GWAS Catalog for GC11M130915 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M130915 Gene

Localization for GC11M130915 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M130915 Gene

Pathways & Interactions for GC11M130915 Gene

PathCards logo

SuperPathways for GC11M130915 Gene

No Data Available

Interacting Proteins for GC11M130915 Gene

Gene Ontology (GO) - Biological Process for GC11M130915 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11M130915 Gene

Drugs & Compounds for GC11M130915 Gene

No Compound Related Data Available

Transcripts for GC11M130915 Gene

fRNAdb Secondary structures for GC11M130915 Gene

  • FR334874

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M130915 Gene

No ASD Table

Relevant External Links for GC11M130915 Gene

GeneLoc Exon Structure for
GC11M130915

No data available for mRNA/cDNA for GC11M130915 Gene

Expression for GC11M130915 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M130915 Gene

Orthologs for GC11M130915 Gene

No data available for Orthologs and Evolution for GC11M130915 Gene

Paralogs for GC11M130915 Gene

No data available for Paralogs for GC11M130915 Gene

Variants for GC11M130915 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M130915 Gene

Disorders for GC11M130915 Gene

No disorders were found for GC11M130915 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M130915 Gene

Publications for GC11M130915 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC11M130915 Gene

Products for GC11M130915 Gene

Sources for GC11M130915 Gene

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