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Aliases for GC11M113416 Gene

Subcategory (RNA class) for GC11M113416 Gene

lncRNA

Quality Score for this RNA gene is

19.2

Aliases for GC11M113416 Gene

No Aliases found

No data available for External Ids for GC11M113416 Gene

Summaries for GC11M113416 Gene

GeneCards Summary for GC11M113416 Gene

GC11M113416 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC11M113416 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC11M113416

Additional gene information for GC11M113416 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M113416 Gene

Genomics for GC11M113416 Gene

GeneHancer (GH) Regulatory Elements for GC11M113416 Gene

Promoters and enhancers for GC11M113416 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J113445 Enhancer 0.7 ENCODE 0.3 -30.3 -30284 3.2 ATF1 ZBTB21 INSM2 BATF IRF4 FOSL1 CTBP1 PRDM10 FOS ZNF600 DRD2 MIR4301 GC11M113416 GC11M113417
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC11M113416 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M113416 Gene

Genomic Locations for GC11M113416 Gene
chr11:113,416,822-113,417,041
(GRCh38/hg38)
Size:
220 bases
Orientation:
Minus strand

Genomic View for GC11M113416 Gene

Genes around GC11M113416 on UCSC Golden Path with GeneCards custom track

GC11M113416 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M113416 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11M113416 Gene

ORGUL Member Location for GC11M113416 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M113416 Gene

Proteins for GC11M113416 Gene

Post-translational modifications for GC11M113416 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M113416 Gene

Domains & Families for GC11M113416 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M113416 Gene

Function for GC11M113416 Gene

Phenotypes From GWAS Catalog for GC11M113416 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M113416 Gene

Localization for GC11M113416 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M113416 Gene

Pathways & Interactions for GC11M113416 Gene

SuperPathways for GC11M113416 Gene

No Data Available

Interacting Proteins for GC11M113416 Gene

Gene Ontology (GO) - Biological Process for GC11M113416 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11M113416 Gene

Drugs & Compounds for GC11M113416 Gene

No Compound Related Data Available

Transcripts for GC11M113416 Gene

fRNAdb Secondary structures for GC11M113416 Gene

  • FR320759
  • FR407563

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M113416 Gene

No ASD Table

Relevant External Links for GC11M113416 Gene

GeneLoc Exon Structure for
GC11M113416

No data available for mRNA/cDNA for GC11M113416 Gene

Expression for GC11M113416 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M113416 Gene

Orthologs for GC11M113416 Gene

No data available for Orthologs and Evolution for GC11M113416 Gene

Paralogs for GC11M113416 Gene

No data available for Paralogs for GC11M113416 Gene

Variants for GC11M113416 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M113416 Gene

Disorders for GC11M113416 Gene

No disorders were found for GC11M113416 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M113416 Gene

Publications for GC11M113416 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  4. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC11M113416 Gene

Sources for GC11M113416 Gene

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