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Aliases for GC11M093820 Gene

Subcategory (RNA class) for GC11M093820 Gene


Quality Score for this RNA gene is


Aliases for GC11M093820 Gene

No Aliases found

No data available for External Ids for GC11M093820 Gene

Summaries for GC11M093820 Gene

GeneCards Summary for GC11M093820 Gene

GC11M093820 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC11M093820 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

View fRNAdb secondary structures for GC11M093820

Additional gene information for GC11M093820 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M093820 Gene

Genomics for GC11M093820 Gene

GeneHancer (GH) Regulatory Elements for GC11M093820 Gene

Promoters and enhancers for GC11M093820 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J093731 Enhancer 0.5 ENCODE 650.7 +0.1 87 1.1 POLR2B POLR2A ZBED1 SUPT5H GC11M093817 GC11M093820 GC11M093822 GC11M093942 GC11M093943 GC11M093946 GC11M093947 GC11M093948 GC11M093949 GC11M093951
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC11M093820 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M093820 Gene

Genomic Locations for GC11M093820 Gene
140 bases
Minus strand

Genomic View for GC11M093820 Gene

Genes around GC11M093820 on UCSC Golden Path with GeneCards custom track

GC11M093820 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M093820 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11M093820 Gene

ORGUL Member Location for GC11M093820 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M093820 Gene

Proteins for GC11M093820 Gene

Post-translational modifications for GC11M093820 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M093820 Gene

Domains & Families for GC11M093820 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M093820 Gene

Function for GC11M093820 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M093820 Gene

Localization for GC11M093820 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M093820 Gene

Pathways & Interactions for GC11M093820 Gene

SuperPathways for GC11M093820 Gene

No Data Available

Interacting Proteins for GC11M093820 Gene

Gene Ontology (GO) - Biological Process for GC11M093820 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11M093820 Gene

Drugs & Compounds for GC11M093820 Gene

No Compound Related Data Available

Transcripts for GC11M093820 Gene

fRNAdb Secondary structures for GC11M093820 Gene

  • FR226125

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M093820 Gene

No ASD Table

Relevant External Links for GC11M093820 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11M093820 Gene

Expression for GC11M093820 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M093820 Gene

Orthologs for GC11M093820 Gene

No data available for Orthologs and Evolution for GC11M093820 Gene

Paralogs for GC11M093820 Gene

No data available for Paralogs for GC11M093820 Gene

Variants for GC11M093820 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M093820 Gene

Disorders for GC11M093820 Gene

No disorders were found for GC11M093820 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M093820 Gene

Publications for GC11M093820 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. A computational screen for mammalian pseudouridylation guide H/ACA RNAs. (PMID: 16373490) Schattner P … Lowe TM (RNA (New York, N.Y.) 2006) 1
  3. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  4. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  5. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC11M093820 Gene

Sources for GC11M093820 Gene

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