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Aliases for GC11M078165 Gene

Subcategory (RNA class) for GC11M078165 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC11M078165 Gene

No Aliases found

ORGUL Members for GC11M078165 Gene

No data available for External Ids for GC11M078165 Gene

Summaries for GC11M078165 Gene

GeneCards Summary for GC11M078165 Gene

GC11M078165 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC11M078165 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for GC11M078165 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M078165 Gene

Genomics for GC11M078165 Gene

GeneHancer (GH) Regulatory Elements for GC11M078165 Gene

Promoters and enhancers for GC11M078165 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I078166 Enhancer 0.9 ENCODE dbSUPER 550.8 -1.1 -1144 1.3 LEF1 TEAD4 TAL1 TCF12 NCOR1 ZNF639 L3MBTL2 CAVIN1 E2F5 ZBTB11 GC11M078165 KCTD21-AS1 ALG8 USP35 KCTD21 NDUFC2 THRSP PIR40351
GH11I078163 Enhancer 0.7 ENCODE dbSUPER 550.8 +1.7 1709 1.3 JUND RXRA MAX HNF4A RAD21 ZKSCAN1 GC11M078165 KCTD21-AS1 ALG8 USP35 KCTD21 PIR47143 GC11P078155
GH11I078168 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 -3.7 -3682 3 FOXA2 ARID4B THRB ZSCAN9 RAD21 RARA YY1 THAP11 MIXL1 HMG20B PIR40351 NDUFC2 THRSP KCTD21 KCTD21-AS1 AAMDC GC11M078165
GH11I078164 Enhancer 0.5 dbSUPER 0.8 +3.6 3628 0.4 NFIC L3MBTL2 VEZF1 RCOR1 CHD2 ALG8 KCTD21-AS1 KCTD21 USP35 GC11M078165 PIR47143 GC11P078155
GH11I078156 Enhancer 0.9 ENCODE 0.4 +9.4 9369 1 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 FOS USP35 KCTD21 INTS4 GC11P078155 PIR47143 GC11M078165 KCTD21-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC11M078165 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M078165 Gene

Genomic Locations for GC11M078165 Gene
chr11:78,165,990-78,166,020
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for GC11M078165 Gene

Genes around GC11M078165 on UCSC Golden Path with GeneCards custom track

GC11M078165 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M078165 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11M078165 Gene

ORGUL Member Location for GC11M078165 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M078165 Gene

Proteins for GC11M078165 Gene

Post-translational modifications for GC11M078165 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M078165 Gene

Domains & Families for GC11M078165 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M078165 Gene

Function for GC11M078165 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M078165 Gene

Localization for GC11M078165 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M078165 Gene

Pathways & Interactions for GC11M078165 Gene

SuperPathways for GC11M078165 Gene

No Data Available

Interacting Proteins for GC11M078165 Gene

Gene Ontology (GO) - Biological Process for GC11M078165 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11M078165 Gene

Drugs & Compounds for GC11M078165 Gene

No Compound Related Data Available

Transcripts for GC11M078165 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M078165 Gene

No ASD Table

Relevant External Links for GC11M078165 Gene

GeneLoc Exon Structure for
GC11M078165

No data available for mRNA/cDNA for GC11M078165 Gene

Expression for GC11M078165 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M078165 Gene

Orthologs for GC11M078165 Gene

No data available for Orthologs and Evolution for GC11M078165 Gene

Paralogs for GC11M078165 Gene

No data available for Paralogs for GC11M078165 Gene

Variants for GC11M078165 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M078165 Gene

Disorders for GC11M078165 Gene

No disorders were found for GC11M078165 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M078165 Gene

Publications for GC11M078165 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC11M078165 Gene

Sources for GC11M078165 Gene

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