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Aliases for GC11M072049 Gene

Subcategory (RNA class) for GC11M072049 Gene


Quality Score for this RNA gene is


Aliases for GC11M072049 Gene

No Aliases found

ORGUL Members for GC11M072049 Gene

No data available for External Ids for GC11M072049 Gene

Summaries for GC11M072049 Gene

GeneCards Summary for GC11M072049 Gene

GC11M072049 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC11M072049 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC11M072049 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M072049 Gene

Genomics for GC11M072049 Gene

GeneHancer (GH) Regulatory Elements for GC11M072049 Gene

Promoters and enhancers for GC11M072049 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J072047 Enhancer 1 Ensembl ENCODE dbSUPER 650.7 -0.8 -788 1.6 SMARCE1 SOX13 FOXA2 RFX1 FOXA3 FOXA1 NR2F2 OSR2 GATA3 JUND GC11M072049 FAM86C1 OR7E128P MIR3165 NUMA1
GH11J072046 Enhancer 0.4 ENCODE dbSUPER 650.7 +1.7 1702 0.7 GC11M072049 FAM86C1 NUMA1 PIR48139
GH11J072037 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.4 +7.1 7118 6.7 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARID4B NEUROD1 SIN3A FEZF1 LRTOMT NUMA1 FAM86C1 LOC100128494 LAMTOR1 ANAPC15 FOLR3 IL18BP RNF121 PHOX2A
GH11J072068 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE 0.3 -22.9 -22864 6.1 RAD21 RFX5 YY1 ZNF766 EGR1 SCRT2 RCOR1 FOS IKZF2 RUNX3 MIR3165 NUMA1 FAM86C1 IL18BP LRTOMT GC11M072049
GH11J072023 Enhancer 1.1 ENCODE dbSUPER 0.3 +23.0 23029 3 HDGF RB1 ARID4B SIN3A ZNF2 ZNF48 RAD21 ZNF121 ARID2 ZNF143 NUMA1 LRTOMT IL18BP ANAPC15 RNF121 LAMTOR1 PHOX2A FAM86C1 PIR48139 GC11M072049
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC11M072049 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M072049 Gene

Genomic Locations for GC11M072049 Gene
96 bases
Minus strand

Genomic View for GC11M072049 Gene

Genes around GC11M072049 on UCSC Golden Path with GeneCards custom track

GC11M072049 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M072049 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M072049 Gene

Proteins for GC11M072049 Gene

Post-translational modifications for GC11M072049 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M072049 Gene

Domains & Families for GC11M072049 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M072049 Gene

Function for GC11M072049 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M072049 Gene

Localization for GC11M072049 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M072049 Gene

Pathways & Interactions for GC11M072049 Gene

SuperPathways for GC11M072049 Gene

No Data Available

Interacting Proteins for GC11M072049 Gene

Gene Ontology (GO) - Biological Process for GC11M072049 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11M072049 Gene

Drugs & Compounds for GC11M072049 Gene

No Compound Related Data Available

Transcripts for GC11M072049 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M072049 Gene

No ASD Table

Relevant External Links for GC11M072049 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11M072049 Gene

Expression for GC11M072049 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M072049 Gene

Orthologs for GC11M072049 Gene

No data available for Orthologs and Evolution for GC11M072049 Gene

Paralogs for GC11M072049 Gene

No data available for Paralogs for GC11M072049 Gene

Variants for GC11M072049 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M072049 Gene

Disorders for GC11M072049 Gene

No disorders were found for GC11M072049 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M072049 Gene

Publications for GC11M072049 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC11M072049 Gene

Sources for GC11M072049 Gene

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