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Aliases for GC11M061964 Gene

Subcategory (RNA class) for GC11M061964 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for GC11M061964 Gene

No Aliases found

ORGUL Members for GC11M061964 Gene

No data available for External Ids for GC11M061964 Gene

Summaries for GC11M061964 Gene

GeneCards Summary for GC11M061964 Gene

GC11M061964 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC11M061964 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC11M061964

Additional gene information for GC11M061964 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M061964 Gene

Genomics for GC11M061964 Gene

GeneHancer (GH) Regulatory Elements for GC11M061964 Gene

Promoters and enhancers for GC11M061964 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I061960 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 -4.1 -4080 16.4 CLOCK MLX ZFP64 DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 E2F8 FTH1 GC11M061968 GC11M061969 GC11M061970 LOC399900 NXF1 INTS5 LOC105369332 CPSF7 UBXN1
GH11I061949 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.4 +14.7 14727 2 PKNOX1 SMAD1 ATF1 BRCA1 POLR2B ZNF766 GLIS2 ZNF548 FOS ATF7 BEST1 CPSF7 NXF1 SNHG1 GANAB TMEM138 EML3 MTA2 CSKMT UBXN1
GH11I061954 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 +9.5 9450 2.3 HDAC1 ELF3 PKNOX1 ATF1 ARNT ARID4B DNMT3B RAD21 CHAMP1 ZNF121 CPSF7 GANAB BEST1 GC11M061964
GH11I061947 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +16.9 16864 0.9 HDGF PKNOX1 RB1 ARID4B FEZF1 ZNF2 ZNF48 RAD21 RFX5 ARID2 BEST1 RAB3IL1 GC11M061964
GH11I061959 Enhancer 0.6 dbSUPER 0.8 +4.8 4836 0.8 BCOR CTCF SIN3A ZMYM3 ZEB2 CTBP1 CBX1 ZSCAN16 ADNP KDM1A GC11M061964 FTH1 BEST1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC11M061964 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M061964 Gene

Genomic Locations for GC11M061964 Gene
chr11:61,964,811-61,964,844
(GRCh38/hg38)
Size:
34 bases
Orientation:
Minus strand

Genomic View for GC11M061964 Gene

Genes around GC11M061964 on UCSC Golden Path with GeneCards custom track

GC11M061964 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M061964 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC11M061964 Gene

ORGUL Member Location for GC11M061964 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M061964 Gene

Proteins for GC11M061964 Gene

Post-translational modifications for GC11M061964 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M061964 Gene

Domains & Families for GC11M061964 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M061964 Gene

Function for GC11M061964 Gene

Phenotypes From GWAS Catalog for GC11M061964 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M061964 Gene

Localization for GC11M061964 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M061964 Gene

Pathways & Interactions for GC11M061964 Gene

SuperPathways for GC11M061964 Gene

No Data Available

Interacting Proteins for GC11M061964 Gene

Gene Ontology (GO) - Biological Process for GC11M061964 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC11M061964 Gene

Drugs & Compounds for GC11M061964 Gene

No Compound Related Data Available

Transcripts for GC11M061964 Gene

fRNAdb Secondary structures for GC11M061964 Gene

  • FR026803
  • FR217789

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M061964 Gene

No ASD Table

Relevant External Links for GC11M061964 Gene

GeneLoc Exon Structure for
GC11M061964

No data available for mRNA/cDNA for GC11M061964 Gene

Expression for GC11M061964 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M061964 Gene

Orthologs for GC11M061964 Gene

No data available for Orthologs and Evolution for GC11M061964 Gene

Paralogs for GC11M061964 Gene

No data available for Paralogs for GC11M061964 Gene

Variants for GC11M061964 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M061964 Gene

Disorders for GC11M061964 Gene

No disorders were found for GC11M061964 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M061964 Gene

Publications for GC11M061964 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC11M061964 Gene

Sources for GC11M061964 Gene

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