Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC11M010801 Gene

Subcategory (RNA class) for GC11M010801 Gene


Quality Score for this RNA gene is


Aliases for GC11M010801 Gene

No Aliases found

ORGUL Members for GC11M010801 Gene

No data available for External Ids for GC11M010801 Gene

Summaries for GC11M010801 Gene

GeneCards Summary for GC11M010801 Gene

GC11M010801 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC11M010801 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC11M010801 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC11M010801 Gene

Genomics for GC11M010801 Gene

GeneHancer (GH) Regulatory Elements for GC11M010801 Gene

Promoters and enhancers for GC11M010801 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J010803 Enhancer 0.2 ENCODE 600.7 -1.7 -1701 0.2 GC11M010801 SNORD97 EIF4G2 GC11M010630
GH11J010805 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 -6.4 -6412 5.6 SP1 ZFX CC2D1A SIX5 NKRF POLR2A MLLT1 ZNF121 CEBPG GTF2F1 EIF4G2 LOC101928053 ZBED5 CTR9 ZBED5-AS1 GC11M010801 SNORD97 GC11M010630
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC11M010801 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC11M010801 Gene

Genomic Locations for GC11M010801 Gene
143 bases
Minus strand

Genomic View for GC11M010801 Gene

Genes around GC11M010801 on UCSC Golden Path with GeneCards custom track

GC11M010801 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC11M010801 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC11M010801 Gene

Proteins for GC11M010801 Gene

Post-translational modifications for GC11M010801 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC11M010801 Gene

Domains & Families for GC11M010801 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC11M010801 Gene

Function for GC11M010801 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC11M010801 Gene

Localization for GC11M010801 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC11M010801 Gene

Pathways & Interactions for GC11M010801 Gene

PathCards logo

SuperPathways for GC11M010801 Gene

No Data Available

Interacting Proteins for GC11M010801 Gene

Gene Ontology (GO) - Biological Process for GC11M010801 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC11M010801 Gene

Drugs & Compounds for GC11M010801 Gene

No Compound Related Data Available

Transcripts for GC11M010801 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC11M010801 Gene

No ASD Table

Relevant External Links for GC11M010801 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC11M010801 Gene

Expression for GC11M010801 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC11M010801 Gene

Orthologs for GC11M010801 Gene

No data available for Orthologs and Evolution for GC11M010801 Gene

Paralogs for GC11M010801 Gene

No data available for Paralogs for GC11M010801 Gene

Variants for GC11M010801 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC11M010801 Gene

Disorders for GC11M010801 Gene

No disorders were found for GC11M010801 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC11M010801 Gene

Publications for GC11M010801 Gene

  1. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. (PMID: 16381836) Lestrade L … Weber MJ (Nucleic acids research 2006) 1
  2. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  4. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P … Cavaillé J (Nucleic acids research 2003) 1
  5. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C … Bachellerie JP (Journal of molecular biology 2000) 1

No data available for External Links for GC11M010801 Gene

Products for GC11M010801 Gene

Sources for GC11M010801 Gene

Loading form....