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Aliases for GC10P077588 Gene

Subcategory (RNA class) for GC10P077588 Gene


Quality Score for this RNA gene is


Aliases for GC10P077588 Gene

No Aliases found

ORGUL Members for GC10P077588 Gene

No data available for External Ids for GC10P077588 Gene

Summaries for GC10P077588 Gene

GeneCards Summary for GC10P077588 Gene

GC10P077588 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC10P077588 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC10P077588 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P077588 Gene

Genomics for GC10P077588 Gene

GeneHancer (GH) Regulatory Elements for GC10P077588 Gene

Promoters and enhancers for GC10P077588 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077586 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.3 253 3.4 SP7 CEBPG ZBTB8A PRDM10 ZNF692 CTBP1 CEBPB ZNF157 OSR2 MAX GC10P077588 RNA5SP321 ENSG00000213514 DLG5-AS1 KCNMA1
GH10J077582 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 -3.8 -3754 2.6 ZKSCAN8 CBFA2T2 NCOA3 MAFK TRIM24 SMARCA4 FOSL2 CREB1 PRDM10 ATF1 KCNMA1 RPS24 GC10P077588 GC10M077558
GH10J077580 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -6.4 -6441 0.4 SP1 RXRA FOXA2 JUND ATF3 YY1 ZBTB33 NR2F2 RAD21 HNF4A KCNMA1 GC10P077588 GC10M077558
GH10J077578 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -7.9 -7856 1.5 SP1 FOSL2 ZBTB40 KCNMA1 GC10P077588 GC10M077558
GH10J077581 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -5.9 -5907 0.3 YY1 HNF4A GC10P077588 GC10M077558 KCNMA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC10P077588 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10P077588 Gene

Genomic Locations for GC10P077588 Gene
112 bases
Plus strand

Genomic View for GC10P077588 Gene

Genes around GC10P077588 on UCSC Golden Path with GeneCards custom track

GC10P077588 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P077588 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P077588 Gene

Proteins for GC10P077588 Gene

Post-translational modifications for GC10P077588 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P077588 Gene

Domains & Families for GC10P077588 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P077588 Gene

Function for GC10P077588 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P077588 Gene

Localization for GC10P077588 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P077588 Gene

Pathways & Interactions for GC10P077588 Gene

PathCards logo

SuperPathways for GC10P077588 Gene

No Data Available

Interacting Proteins for GC10P077588 Gene

Gene Ontology (GO) - Biological Process for GC10P077588 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC10P077588 Gene

Drugs & Compounds for GC10P077588 Gene

No Compound Related Data Available

Transcripts for GC10P077588 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P077588 Gene

No ASD Table

Relevant External Links for GC10P077588 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC10P077588 Gene

Expression for GC10P077588 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P077588 Gene

Orthologs for GC10P077588 Gene

No data available for Orthologs and Evolution for GC10P077588 Gene

Paralogs for GC10P077588 Gene

No data available for Paralogs for GC10P077588 Gene

Variants for GC10P077588 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10P077588 Gene

Disorders for GC10P077588 Gene

No disorders were found for GC10P077588 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P077588 Gene

Publications for GC10P077588 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

No data available for External Links for GC10P077588 Gene

Products for GC10P077588 Gene

Sources for GC10P077588 Gene

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