Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC10P077007 Gene

Subcategory (RNA class) for GC10P077007 Gene

undefined

Quality Score for this RNA gene is

13.4

Aliases for GC10P077007 Gene

No Aliases found

ORGUL Members for GC10P077007 Gene

No data available for External Ids for GC10P077007 Gene

Summaries for GC10P077007 Gene

GeneCards Summary for GC10P077007 Gene

GC10P077007 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10P077007 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10P077007

Additional gene information for GC10P077007 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P077007 Gene

Genomics for GC10P077007 Gene

GeneHancer (GH) Regulatory Elements for GC10P077007 Gene

Promoters and enhancers for GC10P077007 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077006 Enhancer 0.6 Ensembl ENCODE 600.7 -0.2 -168 1.3 ATF2 ATF7 GC10P077007 GC10P076928 KCNMA1
GH10J077005 Enhancer 0.8 Ensembl ENCODE 0.7 -2.3 -2290 0.6 CTCF RAD21 IKZF1 TRIM22 SMC3 ZSCAN5A ZNF654 ZNF660 ZNF143 GC10P077007 GC10P076928 KCNMA1
GH10J076984 Enhancer 0.9 Ensembl ENCODE 0.3 -21.9 -21891 1.8 CTCF RAD21 REST POLR2A TRIM22 ZBTB44 RFX5 SMC3 GATA3 ZNF654 GC10P077007 GC10P076928 KCNMA1
GH10J077011 Enhancer 0.6 Ensembl ENCODE 0.4 +5.0 5010 2 CREB1 ATF2 CBX8 GC10P077007 GC10P077024 KCNMA1
GH10J076972 Enhancer 0.9 Ensembl ENCODE 0.3 -33.6 -33648 2 MZF1 CTBP1 TCF7L2 ZNF561 FOXA1 ZBTB44 ZSCAN5C NFE2 OSR2 ZBTB48 GC10P077007 GC10P076928 KCNMA1-AS1 KCNMA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC10P077007 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10P077007 Gene

Genomic Locations for GC10P077007 Gene
chr10:77,007,391-77,007,607
(GRCh38/hg38)
Size:
217 bases
Orientation:
Plus strand

Genomic View for GC10P077007 Gene

Genes around GC10P077007 on UCSC Golden Path with GeneCards custom track

GC10P077007 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P077007 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P077007 Gene

ORGUL Member Location for GC10P077007 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P077007 Gene

Proteins for GC10P077007 Gene

Post-translational modifications for GC10P077007 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P077007 Gene

Domains & Families for GC10P077007 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P077007 Gene

Function for GC10P077007 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P077007 Gene

Localization for GC10P077007 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P077007 Gene

Pathways & Interactions for GC10P077007 Gene

PathCards logo

SuperPathways for GC10P077007 Gene

No Data Available

Interacting Proteins for GC10P077007 Gene

Gene Ontology (GO) - Biological Process for GC10P077007 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P077007 Gene

Drugs & Compounds for GC10P077007 Gene

No Compound Related Data Available

Transcripts for GC10P077007 Gene

fRNAdb Secondary structures for GC10P077007 Gene

  • FR371775

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P077007 Gene

No ASD Table

Relevant External Links for GC10P077007 Gene

GeneLoc Exon Structure for
GC10P077007

No data available for mRNA/cDNA for GC10P077007 Gene

Expression for GC10P077007 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P077007 Gene

Orthologs for GC10P077007 Gene

No data available for Orthologs and Evolution for GC10P077007 Gene

Paralogs for GC10P077007 Gene

No data available for Paralogs for GC10P077007 Gene

Variants for GC10P077007 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10P077007 Gene

Disorders for GC10P077007 Gene

No disorders were found for GC10P077007 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P077007 Gene

Publications for GC10P077007 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC10P077007 Gene

Products for GC10P077007 Gene

Sources for GC10P077007 Gene

Content
Loading form....