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Aliases for GC10P031099 Gene

Subcategory (RNA class) for GC10P031099 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC10P031099 Gene

No Aliases found

ORGUL Members for GC10P031099 Gene

No data available for External Ids for GC10P031099 Gene

Summaries for GC10P031099 Gene

GeneCards Summary for GC10P031099 Gene

GC10P031099 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10P031099 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10P031099

Additional gene information for GC10P031099 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P031099 Gene

Genomics for GC10P031099 Gene

GeneHancer (GH) Regulatory Elements for GC10P031099 Gene

Promoters and enhancers for GC10P031099 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I031100 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 +1.4 1389 1.4 JUN BACH1 EBF1 BATF IRF4 RELA ZNF143 ATF7 ETV6 FOS GC10P031099 ENSG00000272381 ZNF438 LOC105376482 LOC105376481
GH10I031099 Enhancer 0.9 ENCODE dbSUPER 550.8 -0.2 -155 1.4 PKNOX1 JUN HIC1 ZNF335 FOSL1 ZNF366 FOS FOSL2 ZNF687 ZEB2 GC10P031099 ENSG00000272381 ZNF438 GC10M031018 LOC105376481
GH10I031097 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.8 -1791 0.7 GC10P031099 ENSG00000272381 ZNF438 GC10M031018 LOC105376481
GH10I031083 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -16.1 -16079 0.6 HDGF CTCF USF1 RB1 TEAD4 MAX SIN3A RAD21 TEAD3 ZNF143 GC10P031099 GC10M031018 LOC105376481
GH10I031090 Enhancer 0.9 ENCODE dbSUPER 0.4 -8.9 -8904 0.6 PKNOX1 EBF1 IRF4 RELA CTBP1 NFATC1 ATF7 BCLAF1 IKZF2 RUNX3 ENSG00000272381 ZEB1 GC10P031099 GC10M031018 LOC105376481
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10P031099 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10P031099 Gene

Genomic Locations for GC10P031099 Gene
chr10:31,099,980-31,100,217
(GRCh38/hg38)
Size:
238 bases
Orientation:
Plus strand

Genomic View for GC10P031099 Gene

Genes around GC10P031099 on UCSC Golden Path with GeneCards custom track

GC10P031099 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P031099 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10P031099 Gene

ORGUL Member Location for GC10P031099 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P031099 Gene

Proteins for GC10P031099 Gene

Post-translational modifications for GC10P031099 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P031099 Gene

Domains & Families for GC10P031099 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P031099 Gene

Function for GC10P031099 Gene

Phenotypes From GWAS Catalog for GC10P031099 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P031099 Gene

Localization for GC10P031099 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P031099 Gene

Pathways & Interactions for GC10P031099 Gene

SuperPathways for GC10P031099 Gene

No Data Available

Interacting Proteins for GC10P031099 Gene

Gene Ontology (GO) - Biological Process for GC10P031099 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10P031099 Gene

Drugs & Compounds for GC10P031099 Gene

No Compound Related Data Available

Transcripts for GC10P031099 Gene

fRNAdb Secondary structures for GC10P031099 Gene

  • FR150665
  • FR054111

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P031099 Gene

No ASD Table

Relevant External Links for GC10P031099 Gene

GeneLoc Exon Structure for
GC10P031099

No data available for mRNA/cDNA for GC10P031099 Gene

Expression for GC10P031099 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P031099 Gene

Orthologs for GC10P031099 Gene

No data available for Orthologs and Evolution for GC10P031099 Gene

Paralogs for GC10P031099 Gene

No data available for Paralogs for GC10P031099 Gene

Variants for GC10P031099 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10P031099 Gene

Disorders for GC10P031099 Gene

No disorders were found for GC10P031099 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P031099 Gene

Publications for GC10P031099 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC10P031099 Gene

Sources for GC10P031099 Gene

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