Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC10P013727 Gene

Subcategory (RNA class) for GC10P013727 Gene


Quality Score for this RNA gene is


Aliases for GC10P013727 Gene

No Aliases found

ORGUL Members for GC10P013727 Gene

No data available for External Ids for GC10P013727 Gene

Summaries for GC10P013727 Gene

GeneCards Summary for GC10P013727 Gene

GC10P013727 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC10P013727 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC10P013727 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10P013727 Gene

Genomics for GC10P013727 Gene

GeneHancer (GH) Regulatory Elements for GC10P013727 Gene

Promoters and enhancers for GC10P013727 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J013728 Enhancer 0.3 ENCODE 650.7 +1.3 1292 1.6 EGR1 ENSG00000234091 GC10P013727 RNA5SP301 LOC105376426 FRMD4A
GH10J013711 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.4 -12413 8.7 FOXA2 ZNF48 YY1 TCF12 ZNF121 ZNF207 ATF7 FOS RUNX3 JUNB ENSG00000225112 LOC105376426 GC10P013727 FRMD4A
GH10J013723 Enhancer 0.5 ENCODE 0.7 -3.3 -3309 1.4 MITF MAX CEBPG NR2F2 GC10P013727 ENSG00000225112 LOC105376426 FRMD4A
GH10J013724 Enhancer 0.5 ENCODE 0.7 -4.4 -4359 0.2 IRF9 CEBPA HMBOX1 CEBPB CEBPG ZNF24 GC10P013727 ENSG00000225112 LOC105376426 FRMD4A
GH10J013710 Enhancer 0.3 ENCODE 0.4 -16.8 -16831 0.1 ZNF121 ENSG00000225112 LOC105376426 GC10P013727 FRMD4A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10P013727 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10P013727 Gene

Genomic Locations for GC10P013727 Gene
122 bases
Plus strand

Genomic View for GC10P013727 Gene

Genes around GC10P013727 on UCSC Golden Path with GeneCards custom track

GC10P013727 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10P013727 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10P013727 Gene

Proteins for GC10P013727 Gene

Post-translational modifications for GC10P013727 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10P013727 Gene

Domains & Families for GC10P013727 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10P013727 Gene

Function for GC10P013727 Gene

Phenotypes From GWAS Catalog for GC10P013727 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10P013727 Gene

Localization for GC10P013727 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10P013727 Gene

Pathways & Interactions for GC10P013727 Gene

SuperPathways for GC10P013727 Gene

No Data Available

Interacting Proteins for GC10P013727 Gene

Gene Ontology (GO) - Biological Process for GC10P013727 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC10P013727 Gene

Drugs & Compounds for GC10P013727 Gene

No Compound Related Data Available

Transcripts for GC10P013727 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC10P013727 Gene

No ASD Table

Relevant External Links for GC10P013727 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC10P013727 Gene

Expression for GC10P013727 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10P013727 Gene

Orthologs for GC10P013727 Gene

No data available for Orthologs and Evolution for GC10P013727 Gene

Paralogs for GC10P013727 Gene

No data available for Paralogs for GC10P013727 Gene

Variants for GC10P013727 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10P013727 Gene

Disorders for GC10P013727 Gene

No disorders were found for GC10P013727 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10P013727 Gene

Publications for GC10P013727 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

Products for GC10P013727 Gene

Sources for GC10P013727 Gene

Loading form....