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Aliases for GC10M103313 Gene

Subcategory (RNA class) for GC10M103313 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC10M103313 Gene

No Aliases found

ORGUL Members for GC10M103313 Gene

No data available for External Ids for GC10M103313 Gene

Summaries for GC10M103313 Gene

GeneCards Summary for GC10M103313 Gene

GC10M103313 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC10M103313 Gene

  • U11_snRNA: U11 snRNA plays a role in splicing of the minor U12-dependent class of eukaryotic nuclear introns, similar to U1 snRNA in the major class spliceosome it base pairs to the conserved 5' splice site sequence.

Additional gene information for GC10M103313 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M103313 Gene

Genomics for GC10M103313 Gene

GeneHancer (GH) Regulatory Elements for GC10M103313 Gene

Promoters and enhancers for GC10M103313 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I103349 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 -38.3 -38331 1.9 HDGF ZNF133 SIN3A DMAP1 GLI4 ZNF2 ZNF48 ETS1 GLIS2 ZNF213 PCGF6 PDCD11 ENSG00000260461 SLK MIR1307 ATP5MD RNU11-3P NEURL1-AS1 CALHM2 GC10M103313
GH10I103277 Promoter/Enhancer 1.2 EPDnew ENCODE 0.3 +35.1 35142 0.8 ZSCAN5A RING1 CTCF MXI1 KLF1 ZNF777 ZNF449 SIN3A GLIS2 POLR2A INA RPEL1 RNU11-3P GC10M103313
GH10I103281 Enhancer 0.9 Ensembl ENCODE 0.3 +30.7 30716 0.9 MXI1 KLF1 ZFP64 MAX SIN3A ZIC2 GLIS2 ZNF366 POLR2A ZNF239 INA GC10M103313 RNU11-3P
GH10I103284 Enhancer 0.7 ENCODE 0.3 +28.2 28209 0.2 NFIB KLF17 ZEB1 ZNF121 ZNF350 RFX1 NFIA CEBPB ZEB2 EP300 ENSG00000260461 CALHM2 INA GC10M103313 RNU11-3P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10M103313 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10M103313 Gene

Genomic Locations for GC10M103313 Gene
chr10:103,312,435-103,312,568
(GRCh38/hg38)
Size:
134 bases
Orientation:
Minus strand

Genomic View for GC10M103313 Gene

Genes around GC10M103313 on UCSC Golden Path with GeneCards custom track

GC10M103313 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M103313 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M103313 Gene

Proteins for GC10M103313 Gene

Post-translational modifications for GC10M103313 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M103313 Gene

Domains & Families for GC10M103313 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M103313 Gene

Function for GC10M103313 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M103313 Gene

Localization for GC10M103313 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M103313 Gene

Pathways & Interactions for GC10M103313 Gene

SuperPathways for GC10M103313 Gene

No Data Available

Interacting Proteins for GC10M103313 Gene

Gene Ontology (GO) - Biological Process for GC10M103313 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M103313 Gene

Drugs & Compounds for GC10M103313 Gene

No Compound Related Data Available

Transcripts for GC10M103313 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M103313 Gene

No ASD Table

Relevant External Links for GC10M103313 Gene

GeneLoc Exon Structure for
GC10M103313

No data available for mRNA/cDNA for GC10M103313 Gene

Expression for GC10M103313 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M103313 Gene

Orthologs for GC10M103313 Gene

No data available for Orthologs and Evolution for GC10M103313 Gene

Paralogs for GC10M103313 Gene

No data available for Paralogs for GC10M103313 Gene

Variants for GC10M103313 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10M103313 Gene

Disorders for GC10M103313 Gene

No disorders were found for GC10M103313 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M103313 Gene

Publications for GC10M103313 Gene

  1. Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila. (PMID: 15210936) Schneider C … Lührmann R (Proceedings of the National Academy of Sciences of the United States of America 2004) 1
  2. Additional low-abundance human small nuclear ribonucleoproteins: U11, U12, etc. (PMID: 2973606) Montzka KA … Steitz JA (Proceedings of the National Academy of Sciences of the United States of America 1988) 1

Products for GC10M103313 Gene

Sources for GC10M103313 Gene

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