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Aliases for GC10M077085 Gene

Subcategory (RNA class) for GC10M077085 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC10M077085 Gene

No Aliases found

ORGUL Members for GC10M077085 Gene

No data available for External Ids for GC10M077085 Gene

Summaries for GC10M077085 Gene

GeneCards Summary for GC10M077085 Gene

GC10M077085 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC10M077085 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC10M077085

Additional gene information for GC10M077085 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M077085 Gene

Genomics for GC10M077085 Gene

GeneHancer (GH) Regulatory Elements for GC10M077085 Gene

Promoters and enhancers for GC10M077085 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I077084 Enhancer 0.2 ENCODE 550.8 +0.8 797 0.8 GC10M077085 GC10P077036 KCNMA1
GH10I077083 Enhancer 0.4 ENCODE 0.8 +2.5 2502 0.2 CTCF ZNF143 NR2C1 GC10M077085 GC10P077036 KCNMA1
GH10I077085 Enhancer 0.4 ENCODE 0.8 +2.7 2732 0.2 CTCF NR2C1 GC10M077085 GC10P077036 KCNMA1
GH10I077073 Enhancer 0.7 ENCODE 0.4 +12.4 12362 0.1 FOXA2 ZNF449 MAX CEBPG RAD21 YY1 IRF9 HNF4G ATF7 RXRA GC10M077085 GC10P077036 KCNMA1
GH10I077103 Enhancer 0.7 Ensembl ENCODE 0.4 -19.8 -19833 3.2 OSR2 JUND POLR2A ZNF580 RCOR1 FEZF1 GC10M077085 KCNMA1-AS2 KCNMA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10M077085 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10M077085 Gene

Genomic Locations for GC10M077085 Gene
chr10:77,085,500-77,085,570
(GRCh38/hg38)
Size:
71 bases
Orientation:
Minus strand

Genomic View for GC10M077085 Gene

Genes around GC10M077085 on UCSC Golden Path with GeneCards custom track

GC10M077085 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M077085 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M077085 Gene

ORGUL Member Location for GC10M077085 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M077085 Gene

Proteins for GC10M077085 Gene

Post-translational modifications for GC10M077085 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M077085 Gene

Domains & Families for GC10M077085 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M077085 Gene

Function for GC10M077085 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M077085 Gene

Localization for GC10M077085 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M077085 Gene

Pathways & Interactions for GC10M077085 Gene

SuperPathways for GC10M077085 Gene

No Data Available

Interacting Proteins for GC10M077085 Gene

Gene Ontology (GO) - Biological Process for GC10M077085 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M077085 Gene

Drugs & Compounds for GC10M077085 Gene

No Compound Related Data Available

Transcripts for GC10M077085 Gene

fRNAdb Secondary structures for GC10M077085 Gene

  • FR038130
  • FR195650

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M077085 Gene

No ASD Table

Relevant External Links for GC10M077085 Gene

GeneLoc Exon Structure for
GC10M077085

No data available for mRNA/cDNA for GC10M077085 Gene

Expression for GC10M077085 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M077085 Gene

Orthologs for GC10M077085 Gene

No data available for Orthologs and Evolution for GC10M077085 Gene

Paralogs for GC10M077085 Gene

No data available for Paralogs for GC10M077085 Gene

Variants for GC10M077085 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10M077085 Gene

Disorders for GC10M077085 Gene

No disorders were found for GC10M077085 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M077085 Gene

Publications for GC10M077085 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC10M077085 Gene

Sources for GC10M077085 Gene

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