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Aliases for GC10M071945 Gene

Subcategory (RNA class) for GC10M071945 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for GC10M071945 Gene

No Aliases found

ORGUL Members for GC10M071945 Gene

No data available for External Ids for GC10M071945 Gene

Summaries for GC10M071945 Gene

GeneCards Summary for GC10M071945 Gene

GC10M071945 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC10M071945 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC10M071945

Additional gene information for GC10M071945 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M071945 Gene

Genomics for GC10M071945 Gene

GeneHancer (GH) Regulatory Elements for GC10M071945 Gene

Promoters and enhancers for GC10M071945 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J071956 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -10.6 -10585 0.9 FOXA2 KLF17 ZNF2 THRB RAD21 RARA ZNF366 FOS THAP11 ZNF654 CHST3 GC10M071945
GH10J071887 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +55.7 55705 5 PKNOX1 ARNT SIN3A ZNF2 IRF4 POLR2B ZNF766 CBX5 E2F8 KLF13 PSAP DNAJB12 CHST3 VSIR DDIT4 ENSG00000230526 GC10M071945
GH10J071919 Enhancer 1.1 Ensembl ENCODE 0.3 +24.5 24512 4.3 HDGF PKNOX1 ATF1 ZNF766 REST TSHZ1 ZNF592 MBD2 ATF4 SMARCA4 OIT3 VSIR PSAP GC10M071945 ENSG00000230526
GH10J071894 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +49.9 49892 2.2 HDGF ARNT ZNF2 ZNF213 ARID2 ZNF143 ATF7 RUNX3 KLF13 NCOA1 PSAP SLC29A3 VSIR DNAJB12 ENSG00000230526 GC10M071945
GH10J071927 Enhancer 0.7 ENCODE 0.4 +18.0 17988 1.6 SOX13 FOXA2 RARA TEAD3 GATAD2A SOX5 RNF2 TEAD1 FOXA3 HLF GC10M071945 ENSG00000230526
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10M071945 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10M071945 Gene

Genomic Locations for GC10M071945 Gene
chr10:71,945,914-71,945,945
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC10M071945 Gene

Genes around GC10M071945 on UCSC Golden Path with GeneCards custom track

GC10M071945 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M071945 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC10M071945 Gene

ORGUL Member Location for GC10M071945 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M071945 Gene

Proteins for GC10M071945 Gene

Post-translational modifications for GC10M071945 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M071945 Gene

Domains & Families for GC10M071945 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M071945 Gene

Function for GC10M071945 Gene

Phenotypes From GWAS Catalog for GC10M071945 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M071945 Gene

Localization for GC10M071945 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M071945 Gene

Pathways & Interactions for GC10M071945 Gene

SuperPathways for GC10M071945 Gene

No Data Available

Interacting Proteins for GC10M071945 Gene

Gene Ontology (GO) - Biological Process for GC10M071945 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M071945 Gene

Drugs & Compounds for GC10M071945 Gene

No Compound Related Data Available

Transcripts for GC10M071945 Gene

fRNAdb Secondary structures for GC10M071945 Gene

  • FR334816

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M071945 Gene

No ASD Table

Relevant External Links for GC10M071945 Gene

GeneLoc Exon Structure for
GC10M071945

No data available for mRNA/cDNA for GC10M071945 Gene

Expression for GC10M071945 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M071945 Gene

Orthologs for GC10M071945 Gene

No data available for Orthologs and Evolution for GC10M071945 Gene

Paralogs for GC10M071945 Gene

No data available for Paralogs for GC10M071945 Gene

Variants for GC10M071945 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10M071945 Gene

Disorders for GC10M071945 Gene

No disorders were found for GC10M071945 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M071945 Gene

Publications for GC10M071945 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC10M071945 Gene

Sources for GC10M071945 Gene

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