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Aliases for GC10M017482 Gene

Subcategory (RNA class) for GC10M017482 Gene

7SK RNA

Quality Score for this RNA gene is

2

Aliases for GC10M017482 Gene

No Aliases found

ORGUL Members for GC10M017482 Gene

No data available for External Ids for GC10M017482 Gene

Summaries for GC10M017482 Gene

GeneCards Summary for GC10M017482 Gene

GC10M017482 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC10M017482 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC10M017482 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M017482 Gene

Genomics for GC10M017482 Gene

GeneHancer (GH) Regulatory Elements for GC10M017482 Gene

Promoters and enhancers for GC10M017482 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I017508 Enhancer 1.2 Ensembl ENCODE 0.3 -28.7 -28710 5.2 HDGF PKNOX1 SMAD1 ARNT IRF4 GTF3C2 TCF12 ZNF121 GATA2 FOS ST8SIA6 HACD1 GC10M017482 PRPF38AP2
GH10I017473 Enhancer 0.8 ENCODE 0.4 +9.6 9612 0.2 HDAC1 LEF1 BMI1 ZBTB40 YY1 FOSL1 ZNF766 DIDO1 POLR2A FOXK2 LOC105376437 HACD1 GC10M017482
GH10I017504 Enhancer 1 FANTOM5 ENCODE 0.3 -23.6 -23622 3.9 HDGF IRF2 E4F1 RELA ZNF316 SCRT2 MAFK KDM4B GATAD2A SCRT1 ST8SIA6 HACD1 STAM LOC105376438 GC10M017482 PRPF38AP2
GH10I017474 Enhancer 0.7 ENCODE 0.4 +8.9 8872 0.2 SMARCE1 KLF1 L3MBTL2 GTF2E2 ZEB2 DPF2 ZNF592 CHAMP1 SP1 FOSL1 LOC105376437 HACD1 GC10M017482
GH10I017526 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 -45.1 -45140 2.4 JUN CEBPB EP300 ATF2 SP1 GTF3C2 JUND POLR2A FOSL2 ATF7 VIM GC10M017482 PRPF38AP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10M017482 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10M017482 Gene

Genomic Locations for GC10M017482 Gene
chr10:17,482,399-17,482,709
(GRCh38/hg38)
Size:
311 bases
Orientation:
Minus strand

Genomic View for GC10M017482 Gene

Genes around GC10M017482 on UCSC Golden Path with GeneCards custom track

GC10M017482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M017482 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M017482 Gene

Proteins for GC10M017482 Gene

Post-translational modifications for GC10M017482 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M017482 Gene

Domains & Families for GC10M017482 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M017482 Gene

Function for GC10M017482 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M017482 Gene

Localization for GC10M017482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M017482 Gene

Pathways & Interactions for GC10M017482 Gene

SuperPathways for GC10M017482 Gene

No Data Available

Interacting Proteins for GC10M017482 Gene

Gene Ontology (GO) - Biological Process for GC10M017482 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC10M017482 Gene

Drugs & Compounds for GC10M017482 Gene

No Compound Related Data Available

Transcripts for GC10M017482 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M017482 Gene

No ASD Table

Relevant External Links for GC10M017482 Gene

GeneLoc Exon Structure for
GC10M017482

No data available for mRNA/cDNA for GC10M017482 Gene

Expression for GC10M017482 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M017482 Gene

Orthologs for GC10M017482 Gene

No data available for Orthologs and Evolution for GC10M017482 Gene

Paralogs for GC10M017482 Gene

No data available for Paralogs for GC10M017482 Gene

Variants for GC10M017482 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10M017482 Gene

Disorders for GC10M017482 Gene

No disorders were found for GC10M017482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M017482 Gene

Publications for GC10M017482 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

Products for GC10M017482 Gene

Sources for GC10M017482 Gene

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