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Aliases for GC10M007486 Gene

Subcategory (RNA class) for GC10M007486 Gene


Quality Score for this RNA gene is


Aliases for GC10M007486 Gene

No Aliases found

ORGUL Members for GC10M007486 Gene

No data available for External Ids for GC10M007486 Gene

Summaries for GC10M007486 Gene

GeneCards Summary for GC10M007486 Gene

GC10M007486 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC10M007486 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC10M007486 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC10M007486 Gene

Genomics for GC10M007486 Gene

GeneHancer (GH) Regulatory Elements for GC10M007486 Gene

Promoters and enhancers for GC10M007486 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I007487 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 -1.8 -1756 1.9 PKNOX1 ZBTB21 NFIB ZSCAN4 FEZF1 RARA ZNF335 PATZ1 ZSCAN5C PRDM10 GC10M007486 RNU6-535P SFMBT2 LOC105376390
GH10I007480 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +3.4 3366 6.5 PKNOX1 BMI1 BATF IRF4 YY1 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 SFMBT2 TAF3 KIN GC10M007486 RNU6-535P LOC105376388
GH10I007474 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +11.3 11303 1.6 PKNOX1 SIN3A ZIC2 GLIS2 ZBTB48 POLR2A PATZ1 SCRT2 PRDM10 ZNF600 SFMBT2 LOC105376388 RNU6-535P GC10M007486
GH10I007491 Enhancer 0.4 ENCODE dbSUPER 0.8 -4.4 -4425 0 LOC105376390 ITIH5 GC10M007486 RNU6-535P
GH10I007525 Enhancer 1 ENCODE dbSUPER 0.3 -38.8 -38805 0.2 PKNOX1 RB1 ZNF2 RAD21 ARID2 ZNF366 ZNF143 ATF7 BCLAF1 RUNX3 LOC105376390 GC10M007486 RNU6-535P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC10M007486 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC10M007486 Gene

Genomic Locations for GC10M007486 Gene
108 bases
Minus strand

Genomic View for GC10M007486 Gene

Genes around GC10M007486 on UCSC Golden Path with GeneCards custom track

GC10M007486 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC10M007486 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC10M007486 Gene

Proteins for GC10M007486 Gene

Post-translational modifications for GC10M007486 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC10M007486 Gene

Domains & Families for GC10M007486 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC10M007486 Gene

Function for GC10M007486 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC10M007486 Gene

Localization for GC10M007486 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC10M007486 Gene

Pathways & Interactions for GC10M007486 Gene

SuperPathways for GC10M007486 Gene

No Data Available

Interacting Proteins for GC10M007486 Gene

Gene Ontology (GO) - Biological Process for GC10M007486 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC10M007486 Gene

Drugs & Compounds for GC10M007486 Gene

No Compound Related Data Available

Transcripts for GC10M007486 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC10M007486 Gene

No ASD Table

Relevant External Links for GC10M007486 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC10M007486 Gene

Expression for GC10M007486 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC10M007486 Gene

Orthologs for GC10M007486 Gene

No data available for Orthologs and Evolution for GC10M007486 Gene

Paralogs for GC10M007486 Gene

No data available for Paralogs for GC10M007486 Gene

Variants for GC10M007486 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC10M007486 Gene

Disorders for GC10M007486 Gene

No disorders were found for GC10M007486 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC10M007486 Gene

Publications for GC10M007486 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC10M007486 Gene

Sources for GC10M007486 Gene

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