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Aliases for GC0XP107200 Gene

Subcategory (RNA class) for GC0XP107200 Gene


Quality Score for this RNA gene is


Aliases for GC0XP107200 Gene

No Aliases found

No data available for External Ids for GC0XP107200 Gene

Summaries for GC0XP107200 Gene

GeneCards Summary for GC0XP107200 Gene

GC0XP107200 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC0XP107200 Gene - the ORGUL cluster for this gene includes several descriptions:

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

View fRNAdb secondary structures for GC0XP107200

Additional gene information for GC0XP107200 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC0XP107200 Gene

Genomics for GC0XP107200 Gene

GeneHancer (GH) Regulatory Elements for GC0XP107200 Gene

Promoters and enhancers for GC0XP107200 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI107154 Enhancer 1 Ensembl ENCODE 0.2 -45.4 -45373 1.4 ZNF335 EGR1 ZSCAN5C FOS SMAD5 ZNF592 PRDM4 ZBTB26 MGA ZKSCAN1 RBM41 FRMPD3 MYCLP1 GC0XM107132 GC0XP107200 GC0XP107201 NUP62CL
GH0XI107156 Enhancer 0.5 Ensembl 0.3 -44.5 -44463 0.2 ZNF335 ZFHX2 EGR1 ZBTB48 ZSCAN29 ZBTB26 MYCLP1 GC0XM107132 GC0XP107200 GC0XP107201 NUP62CL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC0XP107200 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC0XP107200 Gene

Genomic Locations for GC0XP107200 Gene
1,989 bases
Plus strand

Genomic View for GC0XP107200 Gene

Genes around GC0XP107200 on UCSC Golden Path with GeneCards custom track

GC0XP107200 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XP107200 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC0XP107200 Gene

ORGUL Member Location for GC0XP107200 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XP107200 Gene

Proteins for GC0XP107200 Gene

Post-translational modifications for GC0XP107200 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XP107200 Gene

Domains & Families for GC0XP107200 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XP107200 Gene

Function for GC0XP107200 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XP107200 Gene

Localization for GC0XP107200 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XP107200 Gene

Pathways & Interactions for GC0XP107200 Gene

SuperPathways for GC0XP107200 Gene

No Data Available

Interacting Proteins for GC0XP107200 Gene

Gene Ontology (GO) - Biological Process for GC0XP107200 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC0XP107200 Gene

Drugs & Compounds for GC0XP107200 Gene

No Compound Related Data Available

Transcripts for GC0XP107200 Gene

fRNAdb Secondary structures for GC0XP107200 Gene

  • FR361543
  • FR161344
  • FR098436

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XP107200 Gene

No ASD Table

Relevant External Links for GC0XP107200 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC0XP107200 Gene

Expression for GC0XP107200 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XP107200 Gene

Orthologs for GC0XP107200 Gene

No data available for Orthologs and Evolution for GC0XP107200 Gene

Paralogs for GC0XP107200 Gene

No data available for Paralogs for GC0XP107200 Gene

Variants for GC0XP107200 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC0XP107200 Gene

Disorders for GC0XP107200 Gene

No disorders were found for GC0XP107200 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XP107200 Gene

Publications for GC0XP107200 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. (PMID: 15790807) Cheng J … Gingeras TR (Science (New York, N.Y.) 2005) 1
  4. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC0XP107200 Gene

Sources for GC0XP107200 Gene

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