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Aliases for GC0XP048480 Gene

Subcategory (RNA class) for GC0XP048480 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC0XP048480 Gene

No Aliases found

ORGUL Members for GC0XP048480 Gene

No data available for External Ids for GC0XP048480 Gene

Summaries for GC0XP048480 Gene

GeneCards Summary for GC0XP048480 Gene

GC0XP048480 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC0XP048480 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC0XP048480 Gene

Genomics for GC0XP048480 Gene

GeneHancer (GH) Regulatory Elements for GC0XP048480 Gene

Promoters and enhancers for GC0XP048480 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI048474 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.8 -4.2 -4198 3.5 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF143 SP3 FTSJ1 ENSG00000270012 ENSG00000204620 ZNF81 CCDC22 RBM3 ARAF GC0XP048480
GH0XI048508 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 +28.3 28252 1.9 ATF1 SMAD1 SIN3A POLR2B GLIS2 ZNF143 ATF7 RUNX3 SP3 NFYC LOC101927635 PORCN ENSG00000204620 GC0XP048480
GH0XI048485 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +7.7 7694 6 HDAC1 PKNOX1 ZNF121 RCOR1 ZNF548 FOS ATF7 CREM USF2 ELF1 FTSJ1 ENSG00000204620 PORCN ZNF81 RBM3 EBP ENSG00000270012 ENSG00000228343 SLC38A5 ZNF630
GH0XI048491 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +12.0 12022 1.7 SMARCE1 ZSCAN4 JUN ELF1 DPF2 NCOA2 FOSL1 JUND CTBP1 SMARCA4 SLC38A5 EBP RBM3 WAS PORCN OTUD5 GC0XP048480 LOC101927635
GH0XI048497 Enhancer 0.7 ENCODE 0.4 +17.6 17584 1.1 JUN KLF17 ZIC2 FOSL1 ZFHX2 EGR1 FOS EGR2 SMARCE1 ZNF189 ENSG00000204620 LOC101927635 GC0XP048480
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC0XP048480 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC0XP048480 Gene

Genomic Locations for GC0XP048480 Gene
chrX:48,480,698-48,508,822
(GRCh38/hg38)
Size:
28,125 bases
Orientation:
Plus strand

Genomic View for GC0XP048480 Gene

Genes around GC0XP048480 on UCSC Golden Path with GeneCards custom track

GC0XP048480 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XP048480 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XP048480 Gene

Proteins for GC0XP048480 Gene

Post-translational modifications for GC0XP048480 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XP048480 Gene

Domains & Families for GC0XP048480 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XP048480 Gene

Function for GC0XP048480 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XP048480 Gene

Localization for GC0XP048480 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XP048480 Gene

Pathways & Interactions for GC0XP048480 Gene

SuperPathways for GC0XP048480 Gene

No Data Available

Interacting Proteins for GC0XP048480 Gene

Gene Ontology (GO) - Biological Process for GC0XP048480 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XP048480 Gene

Drugs & Compounds for GC0XP048480 Gene

No Compound Related Data Available

Transcripts for GC0XP048480 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XP048480 Gene

No ASD Table

Relevant External Links for GC0XP048480 Gene

GeneLoc Exon Structure for
GC0XP048480

No data available for mRNA/cDNA for GC0XP048480 Gene

Expression for GC0XP048480 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XP048480 Gene

Orthologs for GC0XP048480 Gene

No data available for Orthologs and Evolution for GC0XP048480 Gene

Paralogs for GC0XP048480 Gene

No data available for Paralogs for GC0XP048480 Gene

Variants for GC0XP048480 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC0XP048480 Gene

Disorders for GC0XP048480 Gene

No disorders were found for GC0XP048480 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XP048480 Gene

Publications for GC0XP048480 Gene

No publications were found for GC0XP048480 Gene.

Products for GC0XP048480 Gene

Sources for GC0XP048480 Gene

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