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Aliases for GC0XM123858 Gene

Subcategory (RNA class) for GC0XM123858 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC0XM123858 Gene

No Aliases found

ORGUL Members for GC0XM123858 Gene

No data available for External Ids for GC0XM123858 Gene

Summaries for GC0XM123858 Gene

GeneCards Summary for GC0XM123858 Gene

GC0XM123858 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC0XM123858 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC0XM123858 Gene

Genomics for GC0XM123858 Gene

GeneHancer (GH) Regulatory Elements for GC0XM123858 Gene

Promoters and enhancers for GC0XM123858 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI123846 Enhancer 1.1 Ensembl ENCODE 0.4 +10.2 10231 0.7 ATF1 POLR2B GLIS2 FOS ATF7 CAVIN1 NCOA1 REST TSHZ1 SMARCA4 XIAP ENSG00000199705 GC0XM123858 RN7SL190P
GH0XI123822 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +32.9 32903 3.7 ELF3 PKNOX1 MLX ARID4B ZSCAN9 RARA YY1 FOS CREM MIXL1 RN7SL190P ENSG00000199705 GC0XM123858
GH0XI123829 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +26.9 26859 1.5 FOXA2 DMAP1 BMI1 IRF4 RARA YY1 IKZF2 RUNX3 SP5 CEBPB RN7SL190P GC0XM123858 ENSG00000199705
GH0XI123835 Enhancer 1 Ensembl ENCODE 0.3 +21.1 21075 0.6 ZNF146 ZBTB21 JUN KLF17 CEBPG RAD21 HIC1 FOSL1 ZNF335 ZNF316 ENSG00000199705 RN7SL190P GC0XM123858
GH0XI123817 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +38.9 38927 1.8 JUND ZNF316 POLR2A USF2 FOSL2 NFE2 PRDM1 EMSY RN7SL190P GC0XM123858 ENSG00000199705
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC0XM123858 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC0XM123858 Gene

Genomic Locations for GC0XM123858 Gene
chrX:123,857,063-123,857,163
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for GC0XM123858 Gene

Genes around GC0XM123858 on UCSC Golden Path with GeneCards custom track

GC0XM123858 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC0XM123858 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC0XM123858 Gene

Proteins for GC0XM123858 Gene

Post-translational modifications for GC0XM123858 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC0XM123858 Gene

Domains & Families for GC0XM123858 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC0XM123858 Gene

Function for GC0XM123858 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC0XM123858 Gene

Localization for GC0XM123858 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC0XM123858 Gene

Pathways & Interactions for GC0XM123858 Gene

SuperPathways for GC0XM123858 Gene

No Data Available

Interacting Proteins for GC0XM123858 Gene

Gene Ontology (GO) - Biological Process for GC0XM123858 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC0XM123858 Gene

Drugs & Compounds for GC0XM123858 Gene

No Compound Related Data Available

Transcripts for GC0XM123858 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC0XM123858 Gene

No ASD Table

Relevant External Links for GC0XM123858 Gene

GeneLoc Exon Structure for
GC0XM123858

No data available for mRNA/cDNA for GC0XM123858 Gene

Expression for GC0XM123858 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC0XM123858 Gene

Orthologs for GC0XM123858 Gene

No data available for Orthologs and Evolution for GC0XM123858 Gene

Paralogs for GC0XM123858 Gene

No data available for Paralogs for GC0XM123858 Gene

Variants for GC0XM123858 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC0XM123858 Gene

Disorders for GC0XM123858 Gene

No disorders were found for GC0XM123858 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC0XM123858 Gene

Publications for GC0XM123858 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC0XM123858 Gene

Sources for GC0XM123858 Gene

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